RNA id: TU132285


Basic Information

Item Value
RNA id TU132285
length 1067
RNA type TUCP
GC content 0.49
exon number 9
gene id elovl1b
representative False

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 24852287 ~ 24873916 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

AGGGGGTTGCGTCGAGAGATTTAAGCGGAAAGGAAGAGGAAGCAGAGCCGACTTCACGCAGTCGCTGGACGAAGTTATCAGTCTGCTTTTCGACAGTTTTCGCAGGTTAACTTCCAgctgcctgcctgcctgcctgcctgcccgcCCGCCCTTATTGTTTACGGAGAGGCTTTGCCGTCTTGTGAAAGAGGAGTCCACGTTGGCTTTTGATGATTTAAGGGGAAAATTCTAGTTTCAATAAGatAATTGGGTCACAACAACACAAGACGGCAAACATGCTTCAAGAGATTCAGGCGATGGGCTCACATGCCATGGATATCTACGACTACCTCTTAGCGGGAATTGatccaCGGCTGAAGGAATATCCACTGATGCAGAATCCTATTCCCATGTCCTCAATATTGCTGTGTTACCTATTCTTTGTAATGTACCTTGGACCTCGCATAATGGCCAATCGAAAGCCTTTCCAGCTAAAGGAAGCCATGATAGTCTACAACTTCACGCTAGTGGCACTGTCAGTATTCATTGTCTACGAATTCCTGATGTCTGGTTGGGCCACAACATATACCTGGCGATGTGACGCAGTTGATACGTCTGACAGTCCTCAAGCACTTCGAATGGTCCGAGTGGCCTGGCTGTTCTGGTTCTCCAAGATTATTGAGCTCATCGACACAATGTTCTTCGTTTTGAGGAAAAAGCACGGCCAGGTCACCTTCCTGCACATCTTCCACCACTCCTTTATGCCCTGGACCTGGTGGTGGGGAGTTGCCTATGCTCCTGGTGGAATGGGATCTTTTCATGCCATGGTGAATTCCTCCGTCCACGTCATCATGTATTTCTACTACGGCCTTGCTGCTGCTGGACCACGCTTCCAGAAGTTTTTGTGGTGGAAGAAATACATGACTGCCATTCAGCTGACCCAGTTTGTCCTGGTATCTCTCCACGCTACCCAGTATTACTTCATGGACAGTTGTGACTATCAGTTCCCAATGGTGCTCCACCTCATCTGGATGTATGGAACCTTCTTCTTTGTGCTCTTCTCCAACTTCTGGATCCAAGCTTACGTT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU132266 lncRNA upstream 16784 24833437 ~ 24835517 (+) False G98019
TU132267 lncRNA upstream 16784 24833437 ~ 24835517 (+) False G98019
TU132269 lncRNA upstream 16784 24833437 ~ 24835517 (+) False G98019
TU132270 lncRNA upstream 16784 24833437 ~ 24835517 (+) False G98019
TU132271 lncRNA upstream 16784 24833437 ~ 24835517 (+) True G98019
TU132293 lncRNA downstream 11546 24885420 ~ 24890376 (+) True G98033
TU132407 lncRNA downstream 317190 25191064 ~ 25191838 (+) True G98128
TU132401 lncRNA downstream 355508 25229382 ~ 25232400 (+) True G98123
TU132450 lncRNA downstream 379599 25253473 ~ 25258486 (+) True G98163
TU132465 lncRNA downstream 549772 25423646 ~ 25479232 (+) True G98176
XM_039810187.1 mRNA upstream 76641 24765447 ~ 24775660 (+) True LOC120564918
XM_039811563.1 mRNA upstream 98432 24749017 ~ 24753869 (+) False LOC120565649
XM_039812166.1 mRNA upstream 119142 24728796 ~ 24733159 (+) False LOC120565988
XM_039812165.1 mRNA upstream 119142 24728801 ~ 24733159 (+) True LOC120565988
XM_039812163.1 mRNA upstream 130204 24711667 ~ 24722097 (+) True si:ch211-221n20.8
XM_039810869.1 mRNA downstream 73726 24947600 ~ 24988333 (+) False slc44a5b
XM_039810871.1 mRNA downstream 73726 24947600 ~ 24988333 (+) False slc44a5b
XM_039810873.1 mRNA downstream 73727 24947601 ~ 24988333 (+) False slc44a5b
XM_039810868.1 mRNA downstream 73728 24947602 ~ 24988068 (+) True slc44a5b
XM_039810870.1 mRNA downstream 73728 24947602 ~ 24988068 (+) False slc44a5b
TU132257 other upstream 68420 24781918 ~ 24783881 (+) True G98012
TU131697 other upstream 1374483 23474782 ~ 23477818 (+) True G97596
TU131620 other upstream 1530392 23321522 ~ 23321909 (+) False pole4
XR_005640351.1 other upstream 2276099 22576129 ~ 22576202 (+) True LOC120566217
XR_005640354.1 other upstream 2277153 22575067 ~ 22575148 (+) True LOC120566220
TU132486 other downstream 658951 25532825 ~ 25547089 (+) True G98194
TU132604 other downstream 856384 25730258 ~ 25732177 (+) False slc35a3a
XR_005640198.1 other downstream 1117632 25991506 ~ 26019371 (+) False dot1l
TU132947 other downstream 1918813 26792687 ~ 26795739 (+) False micos13
XR_005640192.1 other downstream 3154098 28027972 ~ 28084387 (+) False pip5k1ca

Expression Profile