RNA id: XM_039811748.1


Basic Information

Item Value
RNA id XM_039811748.1
length 1719
RNA type mRNA
GC content 0.53
exon number 8
gene id slc35a3a
representative True

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 25730225 ~ 25738789 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

TTTGACAAAAAGACGAGGAAGAAACCTGTACACGGAAGTCATTCAGAATTTTACCTACCATACAGTTTACATACTTGAGGTTTGATTTCATCTGCAGAGTTTTTCGGCATCATTTCGTCTTTCCTCTGGCGGTTAGTTAAACCGTAATGGCACTTAACGATGGGACAGTCGGCGTGGACACCGTGATAAGATAGCGTGTAGTTATCAGCAGACGGTTGATATCCAGTGAGGGTCAATGGACGCCAGGACCTGAAGGGCTGCTGTTTTGACAGCTGGGTTGAGCCTCCAGTACCTGGTCTTTCTGCCCGACAGAGAGAGCTGCTCGAGAACAGACACGACCCGAGGTTTAAACACTAAAGAGGGGGTTATACTACGTAGAGACAAATATACGTATGTGAAGTTGCTTTTAAAGTGCAATTGAAGGCAAGGCAGAAAGGTGAGGGTCACTCCCTGTCAGTGTCAGCGACTCCTTCTCACCAGTGTTTGCTCTCTTCACACCGACCCTTGGTCATGGCCTCTCCCCGGCTGAAATACCTCTCTCTGGGCGTGCTGGTGTTCCAGACCACGTCCCTGGTGCTCACCATGCGGTACTCCCGCACCCTGCAGGCCGAGGGCCCGCGGTACCTGGCCTCCTCGGCGGTGGTGGTGGCCGAGGTCATGAAGATCCTCACCTGTGTGCTGCTCGTCTTCAAGGAGCACAATTACAGCATGCGAGCTCTGAACAGCCTCCTGCGTCAGGAAATTGCCCACAAACCCATAGAAACGCTGAAGCTGGCGATTCCCTCTGGGATCTACACGCTGCAGAACAACCTGCTGTACGTCGCCTTGTCCAACCTAGACGCAGCCACCTACCAGGTGACATACCAGCTGAAGATCCTGACCACGGCTCTGTTCTCGGTGTCCATGCTGGGCCGCAGGCTGGGCGTCTACCAGTGGCTCTCATTGCTGATTCTTATGGTTGGAGTGGCTCTCGTGCAGTGGCCCTCTGAGTCTGCAGCGGCCCCTGAGCAGGAGGCCCTCTCTGCAGGCTCCCAGTTTGTCGGTGTGACAGCAGTTCTGGTGGCGTGCTTCTCCAGCGGGTTCGCCGGTGTCTACTTTGAGAAGATCCTAAAGGAGAGCAAACAGAGCGTCTGGGTCCGCAACATTCAGCTAGGGATGTTTGGCCTGGTGTTTGGCCTCTTTGGGATGCTGAGCTACGATGGAGAGAGGGTGAGGGAGTCAGGAATGTTCCAGGGGTACAGCACCGTCACCTGGACTGTCGTAGCGCTGCAGGCGCTGGGGGGTCTGGTCATAGCAGCGGTCATCAAGTATGCAGACAACATCCTCAAGGGCTTTGCTACATCGCTCTCCATCATCCTGTCAACTCTTATATCGTACTTCTGGCTACAGGACTTCGACCCCACTAGTGTGTTCTTCATGGGGGCTGTTTTGGTAATCGCAGCCACTTTCCTCTACGGCTACGAAGGCAAGCCGTCCCCCAACCCCAGCAGGGCGTAGGACACTCACGGCTGACACTACAGCAGCTGTAGGAGGTCCTGTTGAAGCGTCAAGACATGGAGTTGAAAGGAGGACAGAgagctgggaaaaaaaaaaaggaggggcaAAAGGTCTTTATCGTATATTGTGATcctgaaaaaggaaaagacgGAGCaaagaagaaggagaggaggtAAGCAGGTTGAGTACAGACTACAagaaggtggaaaaaaaaaaaagcaa

Function

GO: NA

KEGG:

id description
K15272 SLC35A1_2_3; solute carrier family 35 (UDP-sugar transporter), member A1/2/3

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU132489 lncRNA upstream 121834 25558113 ~ 25608391 (+) False G98196
TU132490 lncRNA upstream 157350 25558113 ~ 25572875 (+) False G98196
TU132488 lncRNA upstream 170190 25558113 ~ 25560035 (+) True G98196
XR_005640183.1 lncRNA upstream 208938 25520872 ~ 25521287 (+) True LOC120565050
TU132480 lncRNA upstream 214483 25515050 ~ 25515742 (+) True G98188
TU132603 lncRNA downstream 342 25739131 ~ 25740549 (+) True G98280
TU132636 lncRNA downstream 47536 25786325 ~ 25837380 (+) False LOC120565749
XR_005640280.1 lncRNA downstream 47542 25786331 ~ 25837747 (+) True LOC120565749
TU132643 lncRNA downstream 145727 25884516 ~ 25925050 (+) True G98312
TU132705 lncRNA downstream 295972 26034761 ~ 26039847 (+) False oaz1a
XM_039810898.1 mRNA upstream 749 25678536 ~ 25729476 (+) True notch2
XM_039811880.1 mRNA upstream 66521 25653862 ~ 25663704 (+) True sec22bb
XM_039811881.1 mRNA upstream 66521 25653862 ~ 25663704 (+) False sec22bb
XM_039811164.1 mRNA upstream 116812 25601881 ~ 25613413 (+) True npl
XM_039811561.1 mRNA upstream 253990 25468399 ~ 25476235 (+) True abhd17ab
XM_039812330.1 mRNA downstream 10086 25748875 ~ 25755656 (+) True rex1bd
XM_039812326.1 mRNA downstream 31204 25769993 ~ 25784438 (+) True tmem59l
XM_039811584.1 mRNA downstream 102013 25840802 ~ 25937832 (+) True ssbp4
XM_039811583.1 mRNA downstream 102013 25840802 ~ 25937832 (+) False ssbp4
XM_039811585.1 mRNA downstream 169450 25908239 ~ 25937832 (+) False ssbp4
TU132486 other upstream 183136 25532825 ~ 25547089 (+) True G98194
TU132285 other upstream 856351 24852301 ~ 24873874 (+) False elovl1b
TU132286 other upstream 856351 24868017 ~ 24873874 (+) False elovl1b
TU132257 other upstream 946344 24781918 ~ 24783881 (+) True G98012
TU131697 other upstream 2252407 23474782 ~ 23477818 (+) True G97596
XR_005640198.1 other downstream 252717 25991506 ~ 26019371 (+) False dot1l
TU132947 other downstream 1053898 26792687 ~ 26795739 (+) False micos13
XR_005640192.1 other downstream 2289183 28027972 ~ 28084387 (+) False pip5k1ca
XR_005640167.1 other downstream 2398480 28137269 ~ 28146325 (+) False LOC120564865
TU133723 other downstream 3033599 28772388 ~ 28774510 (+) False LOC120565530

Expression Profile