RNA id: TU132643


Basic Information

Item Value
RNA id TU132643
length 342
lncRNA type sense_over
GC content 0.51
exon number 2
gene id G98312
representative True

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 25884516 ~ 25925050 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

cactcactcactcactcactcactcactcactcactcactcactcactcactcactcactccctcACTCACTCGCTTGCTCACTTGGTCACTTGCTACACAACAACAGTGTACAAACAGCACAAAGGTCCCTTGTTGTGCTAGCAGACAGGACAGGCAGCGTCCACGATGGTGGGTTGGATGAATAATTTAGCTGTGTTGGCCCAGCTGTAAGGAGCGGAGGTGCATCTGGAggcccttctctctccctcagcCCAGCACTCACCATCCCATAGTCCATCAATAGACCATTAATATTGCAGCACAGCCTGACACGGTGCAACTATTTCATGCACAAACCCAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_005640280.1 lncRNA upstream 46769 25786331 ~ 25837747 (+) True LOC120565749
TU132636 lncRNA upstream 47136 25786325 ~ 25837380 (+) False LOC120565749
TU132603 lncRNA upstream 143967 25739131 ~ 25740549 (+) True G98280
TU132489 lncRNA upstream 276125 25558113 ~ 25608391 (+) False G98196
TU132490 lncRNA upstream 311641 25558113 ~ 25572875 (+) False G98196
TU132705 lncRNA downstream 109711 26034761 ~ 26039847 (+) False oaz1a
TU132719 lncRNA downstream 210187 26135237 ~ 26136630 (+) True G98363
TU132720 lncRNA downstream 210227 26135277 ~ 26136630 (+) False G98363
TU132754 lncRNA downstream 266818 26191868 ~ 26194089 (+) True G98384
TU132804 lncRNA downstream 367050 26292100 ~ 26292440 (+) False zbtb7a
XM_039812326.1 mRNA upstream 100078 25769993 ~ 25784438 (+) True tmem59l
XM_039812330.1 mRNA upstream 128860 25748875 ~ 25755656 (+) True rex1bd
XM_039811748.1 mRNA upstream 145727 25730225 ~ 25738789 (+) True slc35a3a
XM_039810898.1 mRNA upstream 155040 25678536 ~ 25729476 (+) True notch2
XM_039811881.1 mRNA upstream 220812 25653862 ~ 25663704 (+) False sec22bb
XM_039812115.1 mRNA downstream 13698 25938748 ~ 25951039 (+) True fkbp8
XM_039811384.1 mRNA downstream 26680 25951730 ~ 25983878 (+) True ell
XM_039810693.1 mRNA downstream 66456 25991506 ~ 26019371 (+) True dot1l
XM_039810694.1 mRNA downstream 66456 25991506 ~ 26019371 (+) False dot1l
XM_039810695.1 mRNA downstream 66457 25991507 ~ 26019371 (+) False dot1l
TU132604 other upstream 152339 25730258 ~ 25732177 (+) False slc35a3a
TU132486 other upstream 337427 25532825 ~ 25547089 (+) True G98194
TU132285 other upstream 1010642 24852301 ~ 24873874 (+) False elovl1b
TU132286 other upstream 1010642 24868017 ~ 24873874 (+) False elovl1b
TU132257 other upstream 1100635 24781918 ~ 24783881 (+) True G98012
XR_005640198.1 other downstream 66456 25991506 ~ 26019371 (+) False dot1l
TU132947 other downstream 867637 26792687 ~ 26795739 (+) False micos13
XR_005640192.1 other downstream 2102922 28027972 ~ 28084387 (+) False pip5k1ca
XR_005640167.1 other downstream 2212219 28137269 ~ 28146325 (+) False LOC120564865
TU133723 other downstream 2847338 28772388 ~ 28774510 (+) False LOC120565530

Expression Profile