RNA id: XM_039810453.1


Basic Information

Item Value
RNA id XM_039810453.1
length 6545
RNA type mRNA
GC content 0.47
exon number 4
gene id zbtb7a
representative True

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 26283052 ~ 26295382 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gtgtgtgtgtgttcatagaGAAATCGAGGATGGCTTGTTCTGCTGAAACCCCCCTCCCACTGCGCAGGCTTCAGTCGATCATTTTAATCTCCCCCCCACACACAGGCAGACGGACAGACGGCAGGACGGATACACGGGTGGGGGCTGTGCTAGGCGGCTCGGCGGCAGGCTGGTGGAAGATGTCGTCAGGAGCCGGTGGGAGGGGTGGCAGGCGGCTCAGGGGGACAGCAAGCAGCggtggtggaggagggagaggaggggcaGGAGAGGCAGAGGAAGGCCCAGTGGGGATCCCTTTCCCTGAGCACAGCGCAGACATCCTGGGCAGCCTGAACAAGCAGCGGCTCAGCGGCCTGCTgtgcgatgtgctcctggttaCGCAGGACCGGGAGTTCCCAGCTCACCGCTCCGTCCTGGCGTCATGCAGCTCCTACTTCCACAAGCTCTTCACTTCAGGGGCCGCCGCTGACCAACAGAACATCTACAACATCGACTTTGTGTCGGCAGATGCTCTGGGATCGTTGCTGGACTTTGCCTACACAGCTACATTGACAGTCAGTCACAGCAGTGTGGCTGATATCCTTGCTGCTGCACGCCTCCTGGAAATCCCACCTGTCCAGGACGTCTGTACACACCTGCTGGACACCAAAGTGCTCTCCCTGCCGACGGGCAGTGAGCAaagagatgaagatgaagatgaggaGGGGAAGGGCAGAGGAGGCAGGGAGCAGGGGAACCGAGTGCGGGCCAAGGAATACCTGGAGTACTTCCAGAGAGGGGCGCACtggagcagcagctgcagcacgCCAGAGCTCAGGGACCTGCCCACACACCTGCACTTTAACCACGGGAATGGGGGGGGGCCCAGCAACGGGACTCCTGCTGGCCCTGGTGAGTACTACTCCCCCCTGGCCCTCGCCTTGGCTCAGGCCCCCACACTGGagccagaggaagaggaagaggatgaagaggaagatgaggacGGGGAGGCGATGCAGGGGAACGGAGCAAGTCTGGGGTCGTCTTACTACCCTCCATCCCAAAATGGGCACTTCTACCTCCCCCCTGAGTCTAGGCGGGGGCAGCAGACAGAGGTGGAGGATGGAAGTAGAGAGGCGAGGGAGAGGGGTTCTGCCAGTGCCCTCCTGCAGCAAATGATGGACTCCATCGAGAGGCAGAAGGAGCGTGAAACAACCGGGGAGGAACAGGGCGACGGGGATGACCCCGACATGGAATTTTACTTGAATTATTTTAACAGCACGCAGCATGAGGACCCAGCCTCTGCCGCCATGACGCAGGGAGTGCCGCCGCTCTGGTTATCACGGGGCAGAACGGGCCAAGACAGAgtaggagaaggaggaagagagaggggggggggagagagaggcagcggGGTCGGAGGAGGTGGAGGCGAGAGGAAGATGCGCTCCAAGGCCTTCCAGAAATGCCCCATATGTTCCAAGGTCATTCAAGGAGCAGGCAAGCTACCCCGCCACATCCGAACGCACACGGGAGAGAAACCTTATGAATGCGCCATCTGCAAAGTGCGCTTTACCAGGCAGGACAAGCTCAAGGTTCATATGCGGAAgcatacaggagagaagccttacCTGTGTACGCAATGTGGAGCCGCCTTTGCTCACAACTACGACCTGAAGAACCACATGCGCGTACACACCGGCCTGCGCCCCTATCAGTGCTCAAGCTGCTTTAAGACTTTCGTGCGCTCGGATCACCTGCACCGCCACCTCAAGAAGGACGGCTGCAACGGCATCCCCTCTCGTCGAGGCCGAAAGCCTCGGGTGCGAGAGCCAGGGCTCCTTGATGCCCCCCTGGGTCTGCTGAGCCCAAGCTCCGACACAGGCCCTGGGCCTCGTACCATCAGGGGCCGGCGGCGATCGGAGGCATCCTCCGCAGCAGAGGTTGAGGGGGCTGCTGGAGCCCGTGCACACAGTCCTCAACTGCAGGACTTGGCAGGGGAGGCGGGGCCCTGAGACTGCAGCGGCGACAAGGACACTGCTGGACACCATAGTCACTCTGCACCGCCTGTGAGACAGGCCagtgaacagagaggagaaaaaaacacgcaaaggcaaactttaaaaaacaacaacaactaactATTCCTCTATAAACCAAATCAGGGTGTCACAAAAAATCTAATCTTTATATTTCTTTCTCCTTTTACTTTAGGAAATGGAGTAGACTTGCAAGCACTTGAGTCGGTTTATCTGTTAAAGAGCAAAGAACGCTTCAAATCATGCACCCATGACGTCCACTTTCTGGGCCATTTCTTTCTTTATAATAATAGGGGTTTTATACATTGGCATATGTGCGTAGGCAAATGTATgatagatacaaaaaaaaaaaaaaaactatgcagttgatttagatttttattgGTTTTGTCCTCACAGCCTTCAAAGCTCTAAGCAAGGTGTCTATCAAGCACCTTCTGGCTGCTGTACGGGTGAAGCGAGGACAAATCCTCCCAGTGAAAACAACTCTTTTTCTATTCTTTTGCAGTTCTGAAATGTACAGTTACCATAGAAACAACATTGCCACAAAATGGCATATGCAAGGAAAAACTCACCACAATTTTGATGCAACAGTTTTTTCTCTCTAAATGTTCCAGAAAGAATCAGACAAGGGTTTGATTGAAGTGTTACTTACTCTATAAAAATGCGTTTTAAGAATCTATGGTTTGTCTTATTGCAAAACAAATTCATGTTGAGTCAAATCCACTTTAATGGGGGCTCTTCAGTTGCAGGACTAGGGAATACGAGGGGTGgagggtttgtgtttttaaagcacTACCACCGTCAATGTATCTGTTGGCTCGACTACTTTGCCTCTTATCCCTCAGAACCCTGCAATTTCAGCATTTCTGTTTTCCCTTTAGATTTTGTCTTAATTGTTTGTCGTTCCTTTTTGTTGACTGCTTCGGGTACTTGACACTTTATAattgtatacatgtatatacagcAGGTGGTGATATTGACATTAGTCCCCTCTTAATGCTGAGGTGTACTTACCAATCCTCTTAGGCTTGATGTCATATTTCTCACAGAGTGAAGCTTGTGGGTGGGCGAAATAAACCTGTATGAATGtctgatggggaaaaaaaaaaacccattgAGTCACCCATTTGCCCTAAACTTAACTTAAGTTTAGGGTTTAACTTAACTTGATTTGTATAGTTCCTGCCCAAAGGATGAgaaggttgaatgaatgaatgtgctTAACTTTGTGCAGTTTTTCGGAATCTGTCCTTGTGTGACAAGGCGCGGGTAGCATTTAACCAACCGcaggttaaaggaatggcagGGATCCCGAGTGAGAGAATGACAAAGAGTACGAAGAAGAGATAGATGagcaccttttttttccctATGTTTGCACAGCTTTACTAAAGATATCcaacagagcgagagagagaggttatatttaaaggaagtGGGCTGGTGTTGGGGAGGGAGTGAGTGGAGGTTTATGTATCATGCTTATTCCAATCTTTTTTGCCCTAGGGACCACACAACCATGAGGCAACCTGTATGATGAAGAGAGCAATAAATACCTGTCCAAGTTGGGAGGCCAAATAGGAGCGCAGCTGCAGCTGGTTGATGGGGGAGGGGAACAAGGGAAGGGGAGGGGGATCTCACAATGTCTGTTGCATTCCAAAAAATAATCTCCCCCAGCTCAGCCACGTTTCCAGGCAGGAGGGGATCAAATCAGgccttttctctccctctctctccctctgtatTCCTCTAATGCCCCCGAACTAGCCTAGAGGggatattattatattagagCCTGGTGTTACTGTGGGTAGGATGCCTGGTGCTGGCAGTTTAGTTTGCgagtgtgtttatatgtacgtgtgtttgtgtacatgtgtgtgcgtgGCAGCCAGGGTCGCTCTGGCCACATCATCAGTGTGTGAGTCAGCCACAGCCTGTTCAAACATGCACCCTGAGCTGCCAGCCCCAAtgcactttctctgtctctcacacacacacagacacacgcacacacactctgctcaCTGGGCCCAGGTATCCTGTAGAGAATGGGAAAGCACCAGATCTGACATATCTGTTTGAATATTGCAAGTGACTCCATACATCTGGATTTGTTAGTCTTAAAATACCCAAGTTTTGTTATTGTGATCCAAATCCAAtgttattttttcaaaatagcACATTGAGCTTTTGAGTCAAGAGAACATGTGTGTCACAGCCACCCTGTAATTTCTGCAGTAGTGCTATAGTTCATCTATCAGTCCTTTTTGCACCTTGATTGGAAAGAGGCAGGTTATGAATGCACTTTGTTACTGAGGAGGGCACTTTTGTCAAGAAAAACGGGTACTTTCAAACAAACTTCTGTCCATGGTGGTGAAGTTGAGCTCCTCCACTGGTTTGGTTCAGGTTTTGACGACCAagctgccaaaaaaaaacaatctaaaaGATCCCTAAAAGAGACGCCGGGTGGGTTTCCGATACAACCGTTGAGTTTTGTGACCTTTTAAAAGACTAAATCAATCCATGTAGCTGATCGCACTTGAAGTTAGTTGATGCTGAAATCTAGCAGAGTTGTCTGTTAAGTCTTAATGTAAAGGAAGCGGCTAGAAGAAGGAGGCAGACAAAGAAGAAAGGgcgctgggtgtgtgtgtgtgtgcatgcatgcattttcTTTTCGTGCATGTGCACAAGCATGTGTTGCAGGCTGGAGGGTCTCAGGACAAGCTTGGATAAACAAACTTTGTGTCTGCCCCATCTGTTCACCAGCTACTCTCATAACTACACGTGTTCTCCGAGGAGCCACAGTGAAAATAGGTCCACTGTACCACAGAAGCAAAAATACCATATTGTAAAACAACTCATTGGACAGTTGCTTGTTTACTTCACGGCTCTCTTGGTGCAGATTTGCATACCTTTTTGTTTACCCTTGTTGGTGATTGTCAGGGGTTGGCTACGTCTTCATagttttagtttctttttttgcttctCCGTTATGATGAAGATGGGGTTTATTAATTCGCAGTTTGACTCCCACAGGCTGACCAATGCAGGCCGGGTGTGTGATTTTCATGTAGTGTACTTCATGTACTTGGTATGGACCGCTTAAATCACTTTTGTGTTGATGTGGCAGGATGTCAGACCTGTTTGCCATCTTAAACACTGTTTCTTTGGACCTTAATATTTCCCCGCAAGTCTTACGTTGTTTTGTAGATTAACCAAAGCTTTTGCCCTCGATCTTAGTCTACTGTAGACTAGAGATATTGAAAGTATGTCTATAATTTATCCCGACTGGGACTCCCAGATTTAGCCACACACAGATGCCCTCCTCTTGAATAGATATGCAGAAATGTGTGTGAAATCATACAGCTATTTACTTGAGTTTGCTTTCTCTTGCTCTTTGTATCCTTGTGGACAATAGAATCAGAGGTTTAAGGATGTATGgtttatttctgtctgtctaCACTTGTTTTCTTAAAATAACTTGTTgtgctacatttttttttctaacaatTTTACacggctgtgtgtgtatgtgtgcgtgtgtgtgggttggggtCATGGTTTTGGGTTGCTGTGCCAGGAGGGTGGGGTAAATGGGTGCTTGGGTGGGGTTATGGATATAAAGCCTGATAGCACTGGAAATGGTGCTTTAGCTGAGAGAGCAAAAGTTTGCACTAATGTTAAATGTCCTTGTCCTGCTTATGGGAGAAGGGCAGGCGACCTCAGAAAGGCCTGCGAGTTTCCATGAGCACAGAGCAGTGTGGTTAATCAATGGTCTCTTAAAGAGTCCATCCAACCCATCCGTAGAAATaatcatgtacagtatattaagaAATATACAGAcgtccaacaacaacaaataccaAAGGAGAAGAAATGGCTTGCATTCAAGTCATTGGACATTTTAAGCTACCGAGTTGGATTAAtaagttttgttgttaaatctGAAGGCTCTTGAAAAGAGAACTTTTGATGGACACTAGAAATGGTGTGATTACAGTTCTTCATATTAAGAAATATTCCAAATATACAACATTGAGGCACTTAGAAAGTTCAAAGCCTCACCGAAATCATTTGAAACCTTTTTGAGTTTGTCCTGGTCTGATGGCTGAGATGTACCGTGTGCAGGTGCCAGATAGATTAAATCCAGttcttttttcaattttacAGATGGGATCTTATCAACATTTGTCTCATGTTCAGTCAACTGATGAATAATGAGAATGAAATATATTGGGTTTTGTTGAACACTGTTATTTTGATAATTGCTGAACTGgatgttttcagtttactgtccgaaaaaaaaaaaaagattgaattGAAATGTAATTGAAGCAGACTGGGACTTTGTGGCCTTGTCTGAGCAGCACtaagcttgtttgttttttaatgtttccagACAGTTGTATTGTGCAGTGTGGGGCTGAGGCTCCCTCCCACCAGGTTGACAATGCTAACATCAAGGGCCACAGTGTGGCAGGAACTGACAAAACTCACAActtttgtctatttttttttttt

Function

GO:

id name namespace
GO:0005634 nucleus cellular_component
GO:0046872 metal ion binding molecular_function
GO:0003676 nucleic acid binding molecular_function

KEGG:

id description
K10494 ZBTB7; zinc finger and BTB domain-containing protein 7

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU132754 lncRNA upstream 88963 26191868 ~ 26194089 (+) True G98384
TU132719 lncRNA upstream 146422 26135237 ~ 26136630 (+) True G98363
TU132720 lncRNA upstream 146422 26135277 ~ 26136630 (+) False G98363
TU132705 lncRNA upstream 243205 26034761 ~ 26039847 (+) False oaz1a
TU132643 lncRNA upstream 358002 25884516 ~ 25925050 (+) True G98312
TU132812 lncRNA downstream 44189 26339571 ~ 26342204 (+) False LOC120565098
TU132817 lncRNA downstream 44189 26339571 ~ 26342293 (+) False LOC120565098
TU132823 lncRNA downstream 44189 26339571 ~ 26342204 (+) True LOC120565098
TU132919 lncRNA downstream 202650 26498032 ~ 26498261 (+) True G98494
TU132926 lncRNA downstream 215802 26511184 ~ 26511527 (+) True G98500
XM_039811876.1 mRNA upstream 14556 26258304 ~ 26268496 (+) True map2k2a
XM_039811431.1 mRNA upstream 25605 26244296 ~ 26257447 (+) True pias4a
XM_039811849.1 mRNA upstream 93130 26143887 ~ 26189922 (+) True atp8b3
XM_039811850.1 mRNA upstream 93130 26174461 ~ 26189922 (+) False atp8b3
XM_039812390.1 mRNA upstream 147889 26097785 ~ 26135163 (+) True lingo3a
XM_039810471.1 mRNA downstream 11240 26306622 ~ 26339210 (+) False tcf3b
XM_039810467.1 mRNA downstream 11241 26306623 ~ 26339210 (+) True tcf3b
XM_039810470.1 mRNA downstream 11241 26306623 ~ 26339210 (+) False tcf3b
XM_039810475.1 mRNA downstream 11241 26306623 ~ 26339210 (+) False tcf3b
XM_039810469.1 mRNA downstream 11241 26306623 ~ 26339210 (+) False tcf3b
XR_005640198.1 other upstream 263681 25991506 ~ 26019371 (+) False dot1l
TU132604 other upstream 550875 25730258 ~ 25732177 (+) False slc35a3a
TU132486 other upstream 735963 25532825 ~ 25547089 (+) True G98194
TU132285 other upstream 1409178 24852301 ~ 24873874 (+) False elovl1b
TU132947 other downstream 497305 26792687 ~ 26795739 (+) False micos13
XR_005640192.1 other downstream 1732590 28027972 ~ 28084387 (+) False pip5k1ca
XR_005640167.1 other downstream 1841887 28137269 ~ 28146325 (+) False LOC120564865
TU133723 other downstream 2477006 28772388 ~ 28774510 (+) False LOC120565530
TU133929 other downstream 3368251 29663633 ~ 29665090 (+) True G99297

Expression Profile