RNA id: TU134364


Basic Information

Item Value
RNA id TU134364
length 396
lncRNA type inter_gene
GC content 0.45
exon number 1
gene id G99651
representative True

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 31045905 ~ 31046300 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

AGGTCTCTCAGTCAGAACTAGAGATGCTCATCCATGCCTTAATTTCCTCCCGTATTGACTATTGCAATTCACTTTTCTCCTCACTCAACAAATCTGTCCTTCACCGCCTGTAATCCATTCAAAACACTGCTGCTATGCTTCTTACTAGATCAAACAGGCGCACCCATATCACCCCTCTACTCTACTCCCTTCACTTGCTTTCTGTAACCTACAGGATCCAATTCAAAATTCTTACCATAACCTTTAGAGCTCTACACGGTCAGGCCCCTGATTATCTTGCCAACATAATTCACTGACCCACCCCCTCCCAGTCTCTAAGGTCTGTCAATCAAAATCTGCTATCCACGCCACGCACTTGTCTGAAGACATGTGGGGATAGAGCTTTTGCTGCTATGG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_005640333.1 lncRNA upstream 20429 31023001 ~ 31025476 (+) True LOC120566113
TU134320 lncRNA upstream 21148 31023063 ~ 31024757 (+) False LOC120566113
TU134303 lncRNA upstream 99816 30945788 ~ 30946089 (+) True G99597
XR_005640338.1 lncRNA upstream 120407 30924279 ~ 30925498 (+) True LOC120566117
TU134293 lncRNA upstream 147519 30898163 ~ 30898386 (+) True G99591
TU134372 lncRNA downstream 16311 31062611 ~ 31062864 (+) True G99658
TU134379 lncRNA downstream 49581 31095881 ~ 31137220 (+) False slc1a7b
TU134391 lncRNA downstream 129490 31175790 ~ 31176024 (+) True G99677
TU134415 lncRNA downstream 249195 31295495 ~ 31295722 (+) True G99697
TU134416 lncRNA downstream 249733 31296033 ~ 31296235 (+) True G99698
XM_039812373.1 mRNA upstream 100280 30934084 ~ 30945625 (+) False akr1a1b
XM_039812363.1 mRNA downstream 49581 31095881 ~ 31302827 (+) True slc1a7b
XM_039810883.1 mRNA downstream 357473 31403773 ~ 31513916 (+) True uhmk1
XM_039810199.1 mRNA downstream 587145 31633445 ~ 31643324 (+) False LOC120564930
XM_039811868.1 mRNA downstream 715692 31761992 ~ 31767539 (+) True LOC120565823
XM_039810745.1 mRNA downstream 736926 31783226 ~ 32159445 (+) True mcf2l2
TU134237 other upstream 234669 30810518 ~ 30811236 (+) True G99545
TU134127 other upstream 616614 30427503 ~ 30429291 (+) True si:ch73-389b16.1
TU133929 other upstream 1380815 29663633 ~ 29665090 (+) True G99297
TU133723 other upstream 2271395 28772388 ~ 28774510 (+) False LOC120565530
XR_005640167.1 other upstream 2899580 28137269 ~ 28146325 (+) False LOC120564865
TU134544 other downstream 576398 31622698 ~ 31625796 (+) True G99791
TU134559 other downstream 583516 31629816 ~ 31631501 (+) True G99803
TU134550 other downstream 587265 31633565 ~ 31643446 (+) False LOC120564930
TU134797 other downstream 1829082 32875382 ~ 32878615 (+) False nlgn1
TU134831 other downstream 2221395 33267695 ~ 33269160 (+) False LOC120566032

Expression Profile