RNA id: TU134471


Basic Information

Item Value
RNA id TU134471
length 203
lncRNA type inter_gene
GC content 0.35
exon number 1
gene id G99730
representative True

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 31358064 ~ 31358266 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gtagattctcactgaaggcatcaaaactatgaatgaacacatatggaattatgtacttaacagaaaagtgtgaaataactgaaaacatgtcttatattttagattcttcaaagtggccaccctttgctttttttgataactctgcaaacccttggtgttctctcaatgagcttcatgaggtagtcacctgaaatggttttcac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU134378 lncRNA upstream 53193 31304315 ~ 31304871 (+) True G99664
TU134417 lncRNA upstream 60418 31296323 ~ 31297646 (+) True G99699
TU134416 lncRNA upstream 61829 31296033 ~ 31296235 (+) True G99698
TU134415 lncRNA upstream 62342 31295495 ~ 31295722 (+) True G99697
TU134391 lncRNA upstream 182040 31175790 ~ 31176024 (+) True G99677
TU134472 lncRNA downstream 3014 31361280 ~ 31401732 (+) True G99731
TU134474 lncRNA downstream 3014 31361280 ~ 31396151 (+) False G99731
TU134489 lncRNA downstream 156073 31514339 ~ 31514918 (+) True G99745
TU134488 lncRNA downstream 158407 31516673 ~ 31518008 (+) True G99744
TU134525 lncRNA downstream 189347 31547613 ~ 31548073 (+) True G99781
XM_039812363.1 mRNA upstream 55237 31095881 ~ 31302827 (+) True slc1a7b
XM_039812369.1 mRNA upstream 412439 30934098 ~ 30945625 (+) True akr1a1b
XM_039810883.1 mRNA downstream 45507 31403773 ~ 31513916 (+) True uhmk1
XM_039810199.1 mRNA downstream 275179 31633445 ~ 31643324 (+) False LOC120564930
XM_039811868.1 mRNA downstream 403726 31761992 ~ 31767539 (+) True LOC120565823
XM_039810745.1 mRNA downstream 424960 31783226 ~ 32159445 (+) True mcf2l2
XM_039810749.1 mRNA downstream 424960 31783226 ~ 32159445 (+) False mcf2l2
TU134237 other upstream 546828 30810518 ~ 30811236 (+) True G99545
TU134127 other upstream 928773 30427503 ~ 30429291 (+) True si:ch73-389b16.1
TU133929 other upstream 1692974 29663633 ~ 29665090 (+) True G99297
TU133723 other upstream 2583554 28772388 ~ 28774510 (+) False LOC120565530
XR_005640167.1 other upstream 3211739 28137269 ~ 28146325 (+) False LOC120564865
TU134544 other downstream 264432 31622698 ~ 31625796 (+) True G99791
TU134559 other downstream 271550 31629816 ~ 31631501 (+) True G99803
TU134550 other downstream 275299 31633565 ~ 31643446 (+) False LOC120564930
TU134797 other downstream 1517116 32875382 ~ 32878615 (+) False nlgn1
TU134831 other downstream 1909429 33267695 ~ 33269160 (+) False LOC120566032

Expression Profile