RNA id: TU134536


Basic Information

Item Value
RNA id TU134536
length 524
lncRNA type inter_gene
GC content 0.56
exon number 3
gene id G99789
representative True

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 31575826 ~ 31617317 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ctctctctctctctctctccctctctctctctctctctctctctctctttctctctctctctctctctcctctctctctctctctctctctgtctctctctctctctccctctctctctctctccctctctctctctctctctctctccctctctctctctctctctctctctctctctctctctctctctccctctctctctctctctcctctctctctctctctctctctctctccctctctctctctctctctctctctctctctctctctctctctctgtgtgagcgGATGCGTGAGTGAGTGTGCAGAGTGAGTCTCAGGAGCGTGTCGTTCCAGGACTTGGCGCGGCAGATAGACGTGGACTACGGCACGGTGAGGGACTCGGCGGTCTACGACTACTTCAGGAACAAAGGCACGAACCCTCTGGAGCAGGACAGCACCTacgcagagctgtggaggacaGTCAGCAAGAACAGCGGCATGGACTACTCCGTGTCCAGCCCGTCTGAGGGCATACGCA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU134530 lncRNA upstream 19169 31556182 ~ 31556657 (+) True G99786
TU134529 lncRNA upstream 20692 31554923 ~ 31555134 (+) True G99785
TU134525 lncRNA upstream 27753 31547613 ~ 31548073 (+) True G99781
TU134488 lncRNA upstream 57818 31516673 ~ 31518008 (+) True G99744
TU134489 lncRNA upstream 60908 31514339 ~ 31514918 (+) True G99745
TU134553 lncRNA downstream 12076 31605765 ~ 31612942 (+) True G99797
TU134551 lncRNA downstream 20200 31613889 ~ 31616309 (+) True LOC120564930
TU134539 lncRNA downstream 23349 31617038 ~ 31617317 (+) False G99789
TU134591 lncRNA downstream 53032 31646721 ~ 31647403 (+) True G99823
TU134583 lncRNA downstream 55064 31648753 ~ 31663696 (+) False G99821
XM_039810883.1 mRNA upstream 61910 31403773 ~ 31513916 (+) True uhmk1
XM_039812363.1 mRNA upstream 272999 31095881 ~ 31302827 (+) True slc1a7b
XM_039812370.1 mRNA upstream 630201 30934329 ~ 30945625 (+) False akr1a1b
XM_039810199.1 mRNA downstream 39756 31633445 ~ 31643324 (+) False LOC120564930
XM_039811868.1 mRNA downstream 168303 31761992 ~ 31767539 (+) True LOC120565823
XM_039810745.1 mRNA downstream 189537 31783226 ~ 32159445 (+) True mcf2l2
XM_039810749.1 mRNA downstream 189537 31783226 ~ 32159445 (+) False mcf2l2
XM_039810748.1 mRNA downstream 189537 31783226 ~ 32159445 (+) False mcf2l2
TU134237 other upstream 764590 30810518 ~ 30811236 (+) True G99545
TU134127 other upstream 1146535 30427503 ~ 30429291 (+) True si:ch73-389b16.1
TU133929 other upstream 1910736 29663633 ~ 29665090 (+) True G99297
TU133723 other upstream 2801316 28772388 ~ 28774510 (+) False LOC120565530
XR_005640167.1 other upstream 3429501 28137269 ~ 28146325 (+) False LOC120564865
TU134544 other downstream 29009 31622698 ~ 31625796 (+) True G99791
TU134559 other downstream 36127 31629816 ~ 31631501 (+) True G99803
TU134550 other downstream 39876 31633565 ~ 31643446 (+) False LOC120564930
TU134797 other downstream 1281693 32875382 ~ 32878615 (+) False nlgn1
TU134831 other downstream 1674006 33267695 ~ 33269160 (+) False LOC120566032

Expression Profile