RNA id: TU134625


Basic Information

Item Value
RNA id TU134625
length 276
lncRNA type sense_over
GC content 0.49
exon number 2
gene id LOC120565823
representative False

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 31761992 ~ 31767539 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

CGTTTATGctcttatgattttacttaaataaatacatgttaaaCTTTTAAATCCTCTCCTTGCCTACTTAGTGGATTTTGAAACACAACAAAGTGGTGACCCCGACGCGATCCACTAAGTGGCGCCAGAGGACTTTCCCCTGAATCGAGCAGACAGGACGGACTCCAGTTTTTCCTTCACTCAAAACAGCGCGCTGTCAAAATAAGGTCGCCAGAGCACAGACCCCGGGAGAAGAGGAGCCCCGGAGCAGTGTCAAGGTAGGTGACTGGGTGCGAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU134605 lncRNA upstream 45986 31715726 ~ 31716013 (+) True G99837
TU134604 lncRNA upstream 46500 31715160 ~ 31715499 (+) True G99836
TU134592 lncRNA upstream 62463 31656039 ~ 31699536 (+) True G99824
TU134590 lncRNA upstream 96365 31654270 ~ 31665634 (+) True G99822
TU134584 lncRNA upstream 100687 31649666 ~ 31661312 (+) False G99821
XR_005640201.1 lncRNA downstream 64133 31828785 ~ 31831713 (+) True LOC120565209
XR_005640203.1 lncRNA downstream 67089 31831741 ~ 31832455 (+) True LOC120565211
TU134656 lncRNA downstream 98485 31863137 ~ 31863649 (+) True G99880
XR_005640202.1 lncRNA downstream 256366 32021018 ~ 32028587 (+) True LOC120565210
TU134683 lncRNA downstream 423756 32188408 ~ 32188807 (+) True G99907
XM_039810199.1 mRNA upstream 118675 31633445 ~ 31643324 (+) False LOC120564930
XM_039810883.1 mRNA upstream 248083 31403773 ~ 31513916 (+) True uhmk1
XM_039812363.1 mRNA upstream 459172 31095881 ~ 31302827 (+) True slc1a7b
XM_039812368.1 mRNA upstream 816374 30934519 ~ 30945625 (+) False akr1a1b
XM_039810745.1 mRNA downstream 18574 31783226 ~ 32159445 (+) True mcf2l2
XM_039810749.1 mRNA downstream 18574 31783226 ~ 32159445 (+) False mcf2l2
XM_039810748.1 mRNA downstream 18574 31783226 ~ 32159445 (+) False mcf2l2
XM_039810751.1 mRNA downstream 18574 31783226 ~ 32159445 (+) False mcf2l2
XM_039810746.1 mRNA downstream 18574 31783226 ~ 32159445 (+) False mcf2l2
TU134550 other upstream 118553 31633565 ~ 31643446 (+) False LOC120564930
TU134559 other upstream 130498 31629816 ~ 31631501 (+) True G99803
TU134544 other upstream 136203 31622698 ~ 31625796 (+) True G99791
TU134237 other upstream 950763 30810518 ~ 30811236 (+) True G99545
TU134127 other upstream 1332708 30427503 ~ 30429291 (+) True si:ch73-389b16.1
TU134797 other downstream 1110730 32875382 ~ 32878615 (+) False nlgn1
TU134831 other downstream 1503043 33267695 ~ 33269160 (+) False LOC120566032
TU134878 other downstream 2110557 33875209 ~ 33878331 (+) True G100087
TU134982 other downstream 2739991 34504643 ~ 34507552 (+) True G100174
TU135393 other downstream 4462435 36227087 ~ 36228574 (+) False dsg2.1

Expression Profile