RNA id: TU134982


Basic Information

Item Value
RNA id TU134982
length 354
RNA type TUCP
GC content 0.58
exon number 3
gene id G100174
representative True

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 34504643 ~ 34507552 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

AGTCAGGGTTGTCAATCTTCTTGGGACTCCACTCGCCTTGTACTCGGGGTTGGTGATCATGGGAGGTTCCCACTCTCCGTCCATGTCCTCGTCCCAGTCACTAGGCTTCTTGGCATCAGGGTCGGGGATGGTCTCTGGCTTGTCCCATTCCTCGGGCTTGGTGTCGGTGGGGTCGTCGATCTTGGCCCTGTCGTCCCAGTCGCTGGGCTTCTTGGCCTCTGGGTCCTTGATCTTCTTTAGGGGCAGCATGTCCCAGTCGTCCTCCAGAGAGCCGGACTCCACCTTCTCGTTGTTGATCTTCACCTCGTATGTCTGGTCTGGATTCAGGATCAGCGTGTACAGGTTGGTCAGCTC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU134961 lncRNA upstream 276 34502564 ~ 34504367 (+) True G100159
TU134967 lncRNA upstream 54128 34450281 ~ 34450515 (+) True G100161
TU134947 lncRNA upstream 200297 34304090 ~ 34304346 (+) True G100148
XR_005640305.1 lncRNA upstream 282512 34220623 ~ 34222131 (+) True LOC120565927
TU134936 lncRNA upstream 282521 34220662 ~ 34222122 (+) False LOC120565927
TU135013 lncRNA downstream 158930 34666482 ~ 34669040 (+) True G100199
TU135014 lncRNA downstream 158930 34666482 ~ 34677930 (+) False G100199
TU135031 lncRNA downstream 229955 34737507 ~ 34793890 (+) True G100215
TU135081 lncRNA downstream 341651 34849203 ~ 34849492 (+) True G100257
TU135083 lncRNA downstream 344761 34852313 ~ 34852518 (+) True G100259
XM_039811944.1 mRNA upstream 47687 34454381 ~ 34456956 (+) True LOC120565866
XM_039811945.1 mRNA upstream 47687 34454383 ~ 34456956 (+) False LOC120565866
XM_039811929.1 mRNA upstream 120616 34380747 ~ 34384027 (+) True LOC120565861
XM_039811408.1 mRNA upstream 411068 34066115 ~ 34093575 (+) True LOC120565538
XM_039811409.1 mRNA upstream 411068 34066115 ~ 34093575 (+) False LOC120565538
XM_039810431.1 mRNA downstream 21016 34528568 ~ 34661669 (+) False arhgap39
XM_039810430.1 mRNA downstream 21016 34528568 ~ 34657908 (+) True arhgap39
XM_039812479.1 mRNA downstream 960459 35468011 ~ 35477553 (+) True hyi
XM_039812039.1 mRNA downstream 1165808 35673360 ~ 35678429 (+) True ddx10
XM_039812350.1 mRNA downstream 1192273 35699825 ~ 35723836 (+) True LOC120566096
TU134878 other upstream 626312 33875209 ~ 33878331 (+) True G100087
TU134831 other upstream 1235483 33267695 ~ 33269160 (+) False LOC120566032
TU134797 other upstream 1626028 32875382 ~ 32878615 (+) False nlgn1
TU134550 other upstream 2861197 31633565 ~ 31643446 (+) False LOC120564930
TU134559 other upstream 2873142 31629816 ~ 31631501 (+) True G99803
TU135393 other downstream 1719535 36227087 ~ 36228574 (+) False dsg2.1
TU135480 other downstream 1965986 36473538 ~ 36475195 (+) True G100568
TU135471 other downstream 1987932 36495484 ~ 36534539 (+) False smim24
TU135470 other downstream 2025174 36532726 ~ 36534539 (+) False smim24
TU135631 other downstream 2187885 36695437 ~ 36698869 (+) True G100671

Expression Profile