RNA id: TU135083


Basic Information

Item Value
RNA id TU135083
length 206
lncRNA type inter_gene
GC content 0.57
exon number 1
gene id G100259
representative True

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 34852313 ~ 34852518 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ggccgtgggacagtctggcgaggtcagcgactcaaatctgttcggtgtgtcccgtgccgtcgtccgtctggggggctgtcggcgttcattttggccgacctgacatgttcggtcggcggcagggaagtcgggactcacccggaaatgacgagcggaatgaggtgactagagtctctcaaaatctgacgaaaatcttttaaactgac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU135081 lncRNA upstream 2821 34849203 ~ 34849492 (+) True G100257
TU135031 lncRNA upstream 58423 34737507 ~ 34793890 (+) True G100215
TU135014 lncRNA upstream 174383 34666482 ~ 34677930 (+) False G100199
TU135013 lncRNA upstream 183273 34666482 ~ 34669040 (+) True G100199
TU134962 lncRNA upstream 344711 34502564 ~ 34507602 (+) False G100159
TU135103 lncRNA downstream 21824 34874342 ~ 34877423 (+) True G100279
TU135182 lncRNA downstream 626153 35478671 ~ 35479610 (+) True G100337
TU135233 lncRNA downstream 829211 35681729 ~ 35684226 (+) True G100383
TU135332 lncRNA downstream 955649 35808167 ~ 35808391 (+) True G100453
TU135341 lncRNA downstream 1009489 35862007 ~ 35862327 (+) True G100462
XM_039810431.1 mRNA upstream 190644 34528568 ~ 34661669 (+) False arhgap39
XM_039810430.1 mRNA upstream 194405 34528568 ~ 34657908 (+) True arhgap39
XM_039811944.1 mRNA upstream 395357 34454381 ~ 34456956 (+) True LOC120565866
XM_039811945.1 mRNA upstream 395357 34454383 ~ 34456956 (+) False LOC120565866
XM_039811929.1 mRNA upstream 468286 34380747 ~ 34384027 (+) True LOC120565861
XM_039812479.1 mRNA downstream 615493 35468011 ~ 35477553 (+) True hyi
XM_039812039.1 mRNA downstream 820842 35673360 ~ 35678429 (+) True ddx10
XM_039812350.1 mRNA downstream 847307 35699825 ~ 35723836 (+) True LOC120566096
XM_039812351.1 mRNA downstream 847337 35699855 ~ 35737010 (+) False LOC120566096
XM_039812352.1 mRNA downstream 847337 35699855 ~ 35721555 (+) False LOC120566096
TU134982 other upstream 344761 34504643 ~ 34507552 (+) True G100174
TU134878 other upstream 973982 33875209 ~ 33878331 (+) True G100087
TU134831 other upstream 1583153 33267695 ~ 33269160 (+) False LOC120566032
TU134797 other upstream 1973698 32875382 ~ 32878615 (+) False nlgn1
TU134550 other upstream 3208867 31633565 ~ 31643446 (+) False LOC120564930
TU135393 other downstream 1374569 36227087 ~ 36228574 (+) False dsg2.1
TU135480 other downstream 1621020 36473538 ~ 36475195 (+) True G100568
TU135471 other downstream 1642966 36495484 ~ 36534539 (+) False smim24
TU135470 other downstream 1680208 36532726 ~ 36534539 (+) False smim24
TU135631 other downstream 1842919 36695437 ~ 36698869 (+) True G100671

Expression Profile