RNA id: TU135332



Basic Information


Item Value
RNA id TU135332
length 225
lncRNA type inter_gene
GC content 0.36
exon number 1
gene id G100453
representative True

Chromosome Information


Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 35808167 ~ 35808391 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


GCCAAATTGAGTTGATTTTAATAAAGTGTCAGCAGAGAGTAACTCTGATAATGTCCCTTTGAGTAACAAAGAAGTTTTGTAAGGTAGTATGGTAGTTTTCCAATAAGAGCCTTATACAGTAGATAAAGAGATACCAGTGAGTATCACGTCTTTCTTGGAGAGAAGACCACCCAATACtttcatataaaatacaatgatgtGTACCATAGACATGGCTGGTTATGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU135233 lncRNA upstream 123941 35681729 ~ 35684226 (+) True G100383
TU135182 lncRNA upstream 328557 35478671 ~ 35479610 (+) True G100337
TU135103 lncRNA upstream 930744 34874342 ~ 34877423 (+) True G100279
TU135083 lncRNA upstream 955649 34852313 ~ 34852518 (+) True G100259
TU135081 lncRNA upstream 958675 34849203 ~ 34849492 (+) True G100257
TU135341 lncRNA downstream 53616 35862007 ~ 35862327 (+) True G100462
TU135375 lncRNA downstream 335487 36143878 ~ 36144088 (+) True G100492
TU135410 lncRNA downstream 481058 36289449 ~ 36289686 (+) True G100519
TU135414 lncRNA downstream 483635 36292026 ~ 36292243 (+) True G100523
TU135415 lncRNA downstream 486747 36295138 ~ 36295493 (+) True G100524
XM_039812351.1 mRNA upstream 71157 35699855 ~ 35737010 (+) False LOC120566096
XM_039812350.1 mRNA upstream 84331 35699825 ~ 35723836 (+) True LOC120566096
XM_039812352.1 mRNA upstream 86612 35699855 ~ 35721555 (+) False LOC120566096
XM_039812039.1 mRNA upstream 129738 35673360 ~ 35678429 (+) True ddx10
XM_039812479.1 mRNA upstream 330614 35468011 ~ 35477553 (+) True hyi
XM_039810201.1 mRNA downstream 407073 36215464 ~ 36234599 (+) True dsg2.1
XM_039810508.1 mRNA downstream 429461 36237852 ~ 36255480 (+) False LOC120565108
XM_039810509.1 mRNA downstream 440485 36248876 ~ 36284806 (+) True LOC120565108
XM_039810510.1 mRNA downstream 453548 36261939 ~ 36267815 (+) True LOC120565109
XM_039810505.1 mRNA downstream 490151 36298542 ~ 36327378 (+) True LOC120565107
TU134982 other upstream 1300615 34504643 ~ 34507552 (+) True G100174
TU134878 other upstream 1929836 33875209 ~ 33878331 (+) True G100087
TU134831 other upstream 2539007 33267695 ~ 33269160 (+) False LOC120566032
TU134797 other upstream 2929552 32875382 ~ 32878615 (+) False nlgn1
TU134550 other upstream 4164721 31633565 ~ 31643446 (+) False LOC120564930
TU135393 other downstream 418696 36227087 ~ 36228574 (+) False dsg2.1
TU135480 other downstream 665147 36473538 ~ 36475195 (+) True G100568
TU135471 other downstream 687093 36495484 ~ 36534539 (+) False smim24
TU135470 other downstream 724335 36532726 ~ 36534539 (+) False smim24
TU135631 other downstream 887046 36695437 ~ 36698869 (+) True G100671

Expression Profile