RNA id: TU135393


Basic Information

Item Value
RNA id TU135393
length 387
RNA type TUCP
GC content 0.49
exon number 2
gene id dsg2.1
representative False

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 36215464 ~ 36234599 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GGGAGGTGGAACAAGTGGGGGAGGTGGGTCTGGAGGAGCATCATGGCAAGGTGGGAGCAAATTTGTGACCTATCCAATCAAAATCAATGTGATGAACCAGCCCGAGGGGCCAGCTTTTGACCCAAAGATCAAAAAGATTCCCGTGTCAGAAGGAGGCACCTCCTTCAACGTGAATGATGTCATCGGCCACTACCAGGCAATAGATGGAGACACTGGGAAACCAGCTGAGAATGTCAGGTATGCCAAGGGCTCAGATCCTGACAACTGGCTAACCGTCGACCCTTTGACAGCTGAGATCAAACTGAACAAGAAGCCTGATAGAGAATCTCCATACCTGGTCAATGGGACATATATTGCACAAATAGTCTGCATTACAGAAGGTACGCT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU135375 lncRNA upstream 82999 36143878 ~ 36144088 (+) True G100492
TU135341 lncRNA upstream 364760 35862007 ~ 35862327 (+) True G100462
TU135332 lncRNA upstream 418696 35808167 ~ 35808391 (+) True G100453
TU135233 lncRNA upstream 542861 35681729 ~ 35684226 (+) True G100383
TU135182 lncRNA upstream 747477 35478671 ~ 35479610 (+) True G100337
TU135410 lncRNA downstream 60875 36289449 ~ 36289686 (+) True G100519
TU135414 lncRNA downstream 63452 36292026 ~ 36292243 (+) True G100523
TU135415 lncRNA downstream 66564 36295138 ~ 36295493 (+) True G100524
TU135428 lncRNA downstream 194286 36422860 ~ 36423129 (+) True G100535
TU135431 lncRNA downstream 196018 36424592 ~ 36449148 (+) True G100536
XM_039812351.1 mRNA upstream 490077 35699855 ~ 35737010 (+) False LOC120566096
XM_039812350.1 mRNA upstream 503251 35699825 ~ 35723836 (+) True LOC120566096
XM_039812352.1 mRNA upstream 505532 35699855 ~ 35721555 (+) False LOC120566096
XM_039812039.1 mRNA upstream 548658 35673360 ~ 35678429 (+) True ddx10
XM_039812479.1 mRNA upstream 749534 35468011 ~ 35477553 (+) True hyi
XM_039810508.1 mRNA downstream 9278 36237852 ~ 36255480 (+) False LOC120565108
XM_039810509.1 mRNA downstream 20302 36248876 ~ 36284806 (+) True LOC120565108
XM_039810510.1 mRNA downstream 33365 36261939 ~ 36267815 (+) True LOC120565109
XM_039810505.1 mRNA downstream 69968 36298542 ~ 36327378 (+) True LOC120565107
XM_039810506.1 mRNA downstream 69968 36298542 ~ 36327378 (+) False LOC120565107
TU134982 other upstream 1719535 34504643 ~ 34507552 (+) True G100174
TU134878 other upstream 2348756 33875209 ~ 33878331 (+) True G100087
TU134831 other upstream 2957927 33267695 ~ 33269160 (+) False LOC120566032
TU134797 other upstream 3348472 32875382 ~ 32878615 (+) False nlgn1
TU134550 other upstream 4583641 31633565 ~ 31643446 (+) False LOC120564930
TU135480 other downstream 244964 36473538 ~ 36475195 (+) True G100568
TU135471 other downstream 266910 36495484 ~ 36534539 (+) False smim24
TU135470 other downstream 304152 36532726 ~ 36534539 (+) False smim24
TU135631 other downstream 466863 36695437 ~ 36698869 (+) True G100671
XR_005640357.1 other downstream 903595 37132169 ~ 37132305 (+) True LOC120566223

Expression Profile