RNA id: TU135764


Basic Information

Item Value
RNA id TU135764
length 296
lncRNA type sense_over
GC content 0.35
exon number 2
gene id G100749
representative True

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 37100787 ~ 37102889 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

attttttttttttttttttgtaaaataatactatttttaatttgatcttgcttcgttttctctttggactttcaatttgaattatgaataaatattctcTCCATATATAGCGGCAGTCtagaacatttttaacattaagcACATATACTGCCCCCGTCAGGTCCGGAAGGATTGCATCCCCAGGTACCCTGAAAAATTAGTACTGGCACGTTTTCAGAATTTTGGTACCGAGTTGATACGGAAGTATCGGTTCTCGTGTacgggtgtaagaaaaaatcgatacacttgagtatggc

Function

GO:

id name namespace
GO:1901607 alpha-amino acid biosynthetic process biological_process

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU135762 lncRNA upstream 53669 37046901 ~ 37047118 (+) True G100747
TU135750 lncRNA upstream 57221 37039248 ~ 37043566 (+) True G100738
TU135718 lncRNA upstream 122625 36968687 ~ 36978162 (+) True G100726
TU135709 lncRNA upstream 142457 36937165 ~ 36958330 (+) False prrc2c
TU135880 lncRNA downstream 96348 37199237 ~ 37199455 (+) True G100847
TU135879 lncRNA downstream 363285 37466174 ~ 37475077 (+) True G100846
XR_005640318.1 lncRNA downstream 466195 37569084 ~ 37574819 (+) False LOC120566005
XR_005640317.1 lncRNA downstream 467663 37570552 ~ 37574819 (+) True LOC120566005
XR_005640319.1 lncRNA downstream 467667 37570556 ~ 37574819 (+) False LOC120566005
XM_039810307.1 mRNA upstream 71199 37005441 ~ 37029588 (+) True dnm3a
XM_039810308.1 mRNA upstream 71199 37005442 ~ 37029588 (+) False dnm3a
XM_039810310.1 mRNA upstream 95641 36993143 ~ 37005146 (+) True mettl13
XM_039810312.1 mRNA upstream 113826 36985858 ~ 36986961 (+) True rangrf
XM_039810355.1 mRNA upstream 143810 36932655 ~ 36956977 (+) False prrc2c
XM_039812393.1 mRNA downstream 5684 37108573 ~ 37114224 (+) True mysm1
XM_039811820.1 mRNA downstream 24896 37127785 ~ 37141592 (+) True oma1
XM_039811470.1 mRNA downstream 53587 37156476 ~ 37488073 (+) False dab1a
XM_039811473.1 mRNA downstream 124705 37227594 ~ 37488073 (+) True dab1a
XM_039811472.1 mRNA downstream 124705 37227594 ~ 37488073 (+) False dab1a
TU135631 other upstream 401918 36695437 ~ 36698869 (+) True G100671
TU135471 other upstream 566248 36495484 ~ 36534539 (+) False smim24
TU135470 other upstream 566248 36532726 ~ 36534539 (+) False smim24
TU135480 other upstream 625592 36473538 ~ 36475195 (+) True G100568
TU135393 other upstream 872213 36227087 ~ 36228574 (+) False dsg2.1
XR_005640357.1 other downstream 29280 37132169 ~ 37132305 (+) True LOC120566223
TU135875 other downstream 361025 37463914 ~ 37490072 (+) True G100843
TU136417 other downstream 1774322 38877211 ~ 38880605 (+) False usp46
TU136690 other downstream 2357557 39460446 ~ 39464450 (+) False LOC120565708
TU136718 other downstream 2458233 39561122 ~ 39565955 (+) False reps2

Expression Profile