RNA id: XM_039810213.1


Basic Information

Item Value
RNA id XM_039810213.1
length 2425
RNA type mRNA
GC content 0.50
exon number 13
gene id slc34a2b
representative True

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 39478853 ~ 39487478 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

TATAAAAGCAGCCCTCCGCCTGGCAGAGAGCAACAGGTAGCCCAGGTGACGCGTCCCTCTCCCCGCTCAGAGCGCTCCGCTGCCCGCAGACAGTCATGGCTCCAAGACCACAAGTGGGGACTGATTCCTCCCCCACTCTTGATGACAAGGTTACGGCTAAAGATGTGGCCATCCTGCCGGCTTACTCCACCGTGGACCTGGTGAATGAGGATCCAGATGCAGAAGATCCCTGGGATCTCCCTGAGCTCAAAGACACTGGGATCAAGTGGTCAGAGCTGGATACAAAAGGGAAGATTATGAGAGTGCTGACTGGTATTTTCAAGGCCGTTACGCTGCTGGGACTTCTCTACCTGTTTATCTGCTCGCTGGATGTTCTCAGCTCTGCTTTCCAGCTGGTCGGAGgcaaAGCTGCTGGTGACATCTTCCAGGACAATGTAATATTGTCCAATCCTGTGGCTGGGCTGGTGATCGGGGTGTTAGTCACAGTGTTGGTGCAGAGCTCCAGCACCTCGTCCTCTATTGTGGTCAGCATGGTGTCCTCTGGATTGCTGGACGTTCAGTCTGCGGTGCCGATCATCATGGGCGCCAACATCGGAACATCTGTCACCAACACTATAGTGGCCATGATGCAGGCAGGAGACCGAAATGAGTTCCGCAGGGCTTTTGCTGGCGCTACAGTCCACGACTTCTTCAACTGGCTGTCTGTGCTGATTCTTCTGCCCCTGGAAGTCGCCACCGGTGTTCTCTACAAACTCACCAGCCTCATAATCAAATCTTTTAATATCCAGAGCGGGGAGGACGCCCCCGACCTGCTCAACGTCATCACTGACCCTCTCACCAACTCCATCATCCAGctgGACAAATCTGTTATCACTGGCATTGCCACTGGTGACCCAGCAGCCAGAAACAAGAGTCTGATCAAAGTATGGTGCAAAAAAGCGACTAACACGacTTTCTGGAACGCAACAGTGGAGAACTGCACTGCTGGTGCAGTCTGCTGGGAAGAAGGAAACCTGACCTGGACCCAGATGAACTCGTCTTGGACCGATTACCAACAGAAATGCAAACACATCTTCGTCAATGCTAATCTGCCGGACCTGGCCGTGGGCCTCATTCTCCTGGCCCTGTCTCTGCTCGTCCTCTGCACCTGCCTCATCCTCATCGTCAAGCTGCTCAACTCCATGCTAAAGGGACAGGTGGCCGTGGTCATCAAGAAGGTGCTCAacatggACTTCCCCTTCCCCTTCGCCTGGGTTACCGGCTACATTGCGATGTTGGTGGGAGCAGGGATGACTTTCATTGTTCAGAGCAGCTCCGTGTTCACCTCAGCTATAACTCCTCTAGTTGGTATTGGTGTCATTAGCCTGGAGAGAGCCTATCCTCTGACACTGGGGTCTAATATTGGTACGACAACCACTGCTATACTTGCTGCTATGGCTAGCCCTGGAGAAACACTCTCCAACTCCCTGCAGaTTGCACTTTGCCATTTCTTCTTCAACATCATGGGGATCTTACTGTGGTATCCAATCCCCTTCACGCGGTTGCCCATCAGGTTGGCCAGAGGGCTGGGGAACCATACGGCTAAGTACCGCTGGTTTGCCGCCTTCTACCTCTTCCTGTGCTTCTTGGTTTTACCTCTGTCTGTATTCGGCCTGTCGCTGGCTGGCTGGCAAGTCCTGGTCGGTGTCGGCGTGCCCATCGTTGCGTTGGTCATCTTTGTGATCATAGTCAACATGATGCAGTCTCGCTGCCCCCGCTGCCTGCCAAAGTTCCTCCGTGACTGGGACTTTTTGCCACGGCCCCTGCACTCCATGGCGCCCTGGGACAAGGTGGTGACCAAGGTCTTTGGCTGCTGTGGCAAACACTGCTGCTGGTGCTGCAAATGCTGCAAGTGCTGCAAGTGCTGCAGGAAAAAGGAGGACGAAAAGATTCGGAGGAACAGCCAGAAGAGTCTGGAGATGTACGATAATCCAGCCATGTCAAGAGATGAGGATACAACGGAGGCTGTTAGAGCACCAACACATCTTTAATATTATCAAGTGAAATGTGTATCTTGAGGCTATACTCAATGCAACAATGTATTTGTAACACACCTCTCTCGTTGTGGTATGTTGATGATTCCCCTTTGTTGGATTAAATGCTAAGCACTGTAGTAAACACCACCATGCGGAGAATAGGAACACAAGGGTTGGACATAGTATGAACTTGCTGTTTCCTGGCCATGTGATGTTTATTTTACGATGTTTTCAGTTTATTGTTCAGACTCACTATCTGCTATGACTTAACTATGGGTGGTTCCGAATGTTAtgacatgtttttatatttttatggtaTGTGTAAGAGATTGTTGGTTTTATTTTCAACTTGAACCAGCATTTCTAAATATGTGTTATGCTTCAGTATTTAAGACTATAATATTTGTAAA

Function

GO: NA

KEGG:

id description
K14683 SLC34A, NPT, nptA; solute carrier family 34 (sodium-dependent phosphate cotransporter)

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU136689 lncRNA upstream 40788 39437654 ~ 39438065 (+) True G101484
TU136677 lncRNA upstream 117145 39356483 ~ 39361708 (+) False prdm5
TU136663 lncRNA upstream 199900 39278652 ~ 39278953 (+) True G101464
TU136619 lncRNA upstream 288072 39190066 ~ 39190781 (+) True G101437
TU136609 lncRNA upstream 300107 39178244 ~ 39178746 (+) True G101427
TU136719 lncRNA downstream 76663 39564141 ~ 39565955 (+) False reps2
TU136732 lncRNA downstream 192600 39680078 ~ 39680526 (+) True G101519
TU136796 lncRNA downstream 251869 39739347 ~ 39740271 (+) False LOC120565298
TU136797 lncRNA downstream 251869 39739347 ~ 39739963 (+) False LOC120565298
TU136817 lncRNA downstream 384178 39871656 ~ 39872173 (+) True G101579
XM_039811658.1 mRNA upstream 14409 39454120 ~ 39464444 (+) True LOC120565708
XM_039812443.1 mRNA upstream 117120 39323588 ~ 39361733 (+) True prdm5
XM_039812444.1 mRNA upstream 122116 39323584 ~ 39356737 (+) False prdm5
XM_039812120.1 mRNA upstream 172615 39295336 ~ 39306238 (+) True ndnf
XM_039810865.1 mRNA upstream 267089 39202848 ~ 39211764 (+) True fbxl5
XM_039810207.1 mRNA downstream 25232 39512710 ~ 39513658 (+) True LOC120564940
XM_039810209.1 mRNA downstream 29395 39516873 ~ 39544466 (+) True LOC120564941
XM_039810210.1 mRNA downstream 73583 39561061 ~ 39592762 (+) True reps2
XM_039811121.1 mRNA downstream 110226 39597704 ~ 39661492 (+) False nhsa
XM_039811122.1 mRNA downstream 110226 39597704 ~ 39661492 (+) False nhsa
TU136690 other upstream 14403 39460446 ~ 39464450 (+) False LOC120565708
TU136417 other upstream 598248 38877211 ~ 38880605 (+) False usp46
TU135875 other upstream 1988781 37463914 ~ 37490072 (+) True G100843
XR_005640357.1 other upstream 2346548 37132169 ~ 37132305 (+) True LOC120566223
TU135631 other upstream 2779984 36695437 ~ 36698869 (+) True G100671
TU136718 other downstream 73644 39561122 ~ 39565955 (+) False reps2
XR_005640166.1 other downstream 1027615 40515093 ~ 40552957 (+) False atp10a
unassigned_transcript_390 other downstream 1737613 41225091 ~ 41225162 (+) True trnap-cgg_3
unassigned_transcript_391 other downstream 1738156 41225634 ~ 41225705 (+) True trnap-ugg_3
TU137538 other downstream 1965196 41452674 ~ 41453306 (+) True G102165

Expression Profile