RNA id: XM_039810570.1


Basic Information

Item Value
RNA id XM_039810570.1
length 6749
RNA type mRNA
GC content 0.46
exon number 19
gene id ano8b
representative False

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 14579027 ~ 14619203 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GAAAAGAGAGATGCAATGTGGAATTGggagtgtttgtgtttgtcgaTTTGGTGCCAAAATATATTCAGACTGTGTACCTTGCATTGGGAGAGTGCAGCAGTGAGGTGGCCGTTGCGACAAGCAATAGAGCGAGTCAGTGTTTGGAAGCTGGAGAAAGCAGGATGGAGGGAGAAAGGGACAGATAAGAGGAGAGataAGTTGTTTGGAAAGCGGCTGCTGCAGGCTGGGAGACACATCATGTCTCATAAGTCTTGGATGAAAACGGTGCCCACGGAGAACTGTGATGTCCTCATGACATTTGCAGACACTACAGATGACCACACGTTACTATGGCTACTGAACCACATCCGGCTGGGAATCCCAGAGCTCATCATCCAAATACGACATCACAAGCACACACGAGTCTACGCATTCTTCGTCACCGCTACATATGAAAATTTGTTGCGAGGCGCTGAGGAGATAGGACTGAGGAAAGCGGTGAAGCCTGAATTTGGCGGAGGAGCACGAAACTACTCCTGTGACGAGGACTACATCTACGAGAACATCGAGAGTGAGCTGTGTTTCTTTACTTCACAGGAGAGGCAGAGCATCATTAAATACTGGCTAGACAATCTACGTGCCAAACATGGGGAGGTGCTTCATAATATCAACTTCCTGGAGGGCCAGCCAATTATCCCGGAGCTGAGTGCGCGAGGTGTGATCCAGCAGGTATTTCCTCTCCATGAGCAGAGGAtcctcagtcagctgatgaAGTCCTGGGTCCAGGCTGTTTGTGAGAAACAGCCTTTAGATGATATCTGTGACTACTTTGGGGTGAAGATTGCCATGTATTTTGCCTGGCTGGGATTTTACACCACTTCTATGTTATATCCTGCTGTGATCGGCTTCGTGCTGTGGATGCTCACTGAGTCGGATCAGACGAGCCGTGACATCTGCTGTGTGGTGTTTGCACTGTTCAACGTGGTGTGGGCCACTCTGTTTCTGGAGCGGTGGAAGAGGAGGGGGGCTGAGCTGGCATTCAAGTGGGGAACACTGGATACGCCTGCTGAATCCCTGGAGGAACCACGGCCTCAGTTCCGGGGAGTAAAGCGCTGCAGTCCCGTAACAGGATGTGAGGAGTTCTACTATCCTCCGTGGCGGAGGCGTGTATTCAGGTGGCTGGTCAGCCTGCCCATCTGTATCCTCTGTCTCTGCTTCGTCTTCCTGGTCATGCTCATCTGCTTTGAGCTGCAGGAGTTTGTGATGGGGATCAAGGAAATGCCTCGGCTAGCTCGCTTCATCCCCAAAATCATGCTAGCTATCACTGTGACTGCATGTGACGAGGTGTACAGGAAAATCGCTTGCTGGCTCAATGACATGGAAAACTATAGACTCCAGAGTGCCTATGAGAAAAATCTCATCATCAAAATGGTTCTTTTTCAGTTTGTAAATTCTTATCTCAGCCTTTTTTACATTGGATTCTACCTCAAAGACATTGAGCGCCTGAAAGAGATGCTGGCCACTCTGCTCATCATACGCCAGTTCCTTCAAAATGTGAAGGAGGTGCTGCAGCCTTATCTATATGAGCGCCACAAGCTGGGAGAGCTCACACTGCGAGCTGTGTGGGACCTGCTGCTCTCAGTGCTGCTGAAATATGCACGACTGGCAGCTGGAAAAGCCCAGGTCTCTCCCACCGACCAGGCCATGCCAGGACCTGGACTGAGGGGCACCAGGCCTGGGTTGGGGCAGCCAGATAGAAGGGAAAAGAAGTGTTTGAACGGGGGATGCGGGGTGCCTGATGAGGAGGATGGAGGTGAGAGGGACGAGGCTGACAGCGGGAGGTTCAGTGAAGGAGAGACGGAGGAGGAAAGTCTGATCGACTGTGGTTTGAAGCTGAGGAAAGTCAGCTTCATAGAGAAGgtGGACAGAAGGCCAGTCTGCAGTGGGCCCCCCATGGACACCAGTTTCCTGGAGGAGGGGAGCCCCACGATGGTGGAAAAAGGAATGGACCCTGCCTCTGTATTTGAAATGTGTGACGACGACGATGATAATGGCATCCATGATGTGAAGGAGTCAGGAGGGGGAGCGACAGGCGTGGCTGAGGGAATTAATGCTGGTGCCTCTGCCAGCGCTGCCCCGCTGCCTTCTGGGTCCGAGAGCAGCACATCAGTGCGACACAGGAGAAGAGGCAGGAGCATAGAGAGACCTGAGCCTAAGACAAAAAGGGAATCATGGATCGACCCCcctgaagagagaagagagagcaacaCGCTCACTCAGGCTGAGATGGAGAGCTGCATGCAGACTTATTCTGACACCTTCCAGGACTACCAAGAGATGTTTGTCCAGTTTGGCTACGTGGTGCTCTTCTCCTCAGCCTTCCCTCTGGCTGCCATGTGCGCTCTCATCAACAACCTCATTGAGATCCGCAGCGATGCCTTTAAGCTCTGCACCGGTCTGCAGAGGCCCTTTGGAATCAGAGTGGAGAGCATCGGCCAGTGGCAGACTGCGATGGAAGCCATGGGCCTGATTGCCATCATAGTGAATTGTTACCTGATTGGTCAATGCGGTCAGCTCCAGCGTCTCTTCCCGTGGCTCAGCCCCGAGATGGCCATCATCTCCATCGTCATCCTCGAGCATTTTGCCATCCTCCTGAAGTACGTCATCCATGTGGCCATCCCTGACATTCCTACATGGGTCCGAGAGGAGATGGCTAAACTGGATTATCAGCGCAGGGAGGCTTTTAAGAAGCACGAACGGCATGCGCAGCAGCATTACCAGCAgctgcagaggaggaagagggaggaggaggagaggcagagGCAGGCGGAGCATATGGCCCGCAGGGAAAGGGAGCGGGACGACAGCAAGGGCGACTCCTCTGGGGATCACCACCACGACAAAAGTCACAGCAGCAAATCGCGGCCTGGGGCcggaggaggagggggcagCGGGTCAGACAAACCCAAGAGGCCCAGTTCTCTGTTGGCCAACAATAACGTGATGAAGCTGAAACAGATCATCCCGCTGCAGAGCAAGTTCTCCTCGAGTGGCGCTCGCTCCCCTCAGTCCCCCACCGGAAATGAGCCGAAGCTGCCCGGGTTCCTGAGCTTTAAATTCCTCAAGTCACCTGAGAATAAGAAGGAAGGTGCTGCGGCTTCTGCGGCCGCCACCACAgctgctaacaccacagctacagcatcatcatcatcatcttcatcatcaggTAGCAGCTCTCAGGAGCGTTCTCAGTCACCCAGCAAAGCCTTCAACCCTGGGAAACTGTTTAACTTCGGGAAATCTGAGGGGGGAGCGTGTGTGAACGGGGCTGCGCTGCACAGACCTGGGGAAGGATCATCATCACAGGCGTCAGACAGACAACCATCCAGGTCTGACTTGAACGGTGTTCCAGACGAGATCCCCTCGCCTGGAGGGGAAGGGTCAGAGAACGGACATGCAACAGACTTGGACCCGGCTGGCTCTAaagtctagctccatagagaaCAAACTTGTCATTGGTTACATCTCAACTGAAGAAGGGATGTGTTTACTGTGAGGAGAGGCCTGGCCTACCTTCTGTGCTATCACAGGCTATGTGTAGAAGTACTTGAAGCAGAAAGAGAAGATGAAACTGATGAGAGGTGACTGTTGTTTTGGTTTGCTCTTTTGCtgagagacaaaaaaacaggCTTTATAAGAAAGACGTAAGCCCTCTTGTCATGAccgaataaacacacacacacacacaacacacacacacacacacacacacacacacatacaaacatacaaacacttCCTTGTCTGCAATACATAAAGAAATGCATGAGCTGCGTTTCTAATATTTTTAAGCCTTTAAAGCAGAGAGCTGTGTTTCTTGATTTCTTCTAGTCATAAATTGTAAGCATCTCAATGGCCTCCCACTAGGACATAACAATAACAACACCGCCTGTTGTGGAGacaaaaggattaaaaaaaatgtacacagtGGTATGAAATGATCACCAATTGTACATCAAATAACTTCTGAGAGTGTTTTTAGCCGTCACAACTCAAGTGATTATTAGATATTGTCTCATTTTTAATGTTGAGGAATTCTTGGGCCCTTCACTTTTATATAGAAGTGGAAAAAATGGAAAAGCAATATCAATCAGTGTTTTAATTATTCTTATAAATCATCACAAACCCTCCCATAATAAGCATCCCTGATGTATCACCAgctttatttttaaagctgAGGTGATGTCTGAGCTTTGGACACTTCTTCCCATCCTGTGACGGTGGCAGATCAGTTCGAAAAGGAAGTAAAGAGCTTAGTAAATCGAGCAGTCACTTACCAGTATTTTTCCCAAGAGAGCAAGTGGAAGAGAGacaaggaaaaaaaagcagaagtaAACAAAGGTGGTTTTGAGAAAAAAGAGCATGGAATGTGCGTGCTGTTCTCCATCCAAGCCCGTAGAGCGCCTTATAAACACAGATGGTGCTCCATTCCACACACTCTAACCAGACTTGGCAAACTAGCGTAGAGTTAAAGAAGTAACATTTGCACTAAACCCTTACGCCCTGCATAGAAACCTATCTCGCTCTGCAGGAGAGAGGATCGACACCAGCCTGCCTCATAACATTATGCAAAAGCTGGATTGTTTTGATTTACTCCTTTCACACAGTACATGCTATCTACTCACCTGCCTCTACTCTCAGCAACTATGGGTTTCCTAAATATTCAGAtgaggtgtttttgtttttacaatagTTGCTCTCATTTATGTTGAGCTCCATATCTTTTTTATGCACACCATTTGCTGCATTGTTTTTATTGCAGTGCTGATGGGAATTTCCTTTTTTAACCAAAGCGGTATTTTTCGGATAATACTGTTAACCCGAGAtgtatgtgtactgtatgttctaGGGTGTTCTAAGGTATACATTATGCTAATCTTTTAAGCAAAGCCCACCATCTACCATAAACAGATATTTCACTTCTGCAGGGTCTCCAGAAGGTGGCGCCAGAATTTATTTGCATAGCAAAATGTGTTGTTGAACGGCTTGTTCTGATTCACTATTGACTATTGACCCATAATATCAGTCTTCAGTGTAAAGCAGGGACAGTAACATTAGAGTGTCAGGCTGCAGACTCTTCGAAAGGAAATGTATTATGGTGACATTAgatacacacaggtacacaaagTTTCAGAGGCCATCACACTGTAggttgagagagagaaacatgaaCTATGCATTTTCACATCACCACTTCTGGCATGCATTTTGGCAATACCATTGAGTTGTAGGAGATGTATTACTATAAGTCTAAACTAACTCCCCCACCCACAGCACACATCCtactgcattattattatttgtcgGACTCTATGCATCTTCTTTGTGTCCCTTCAATTTCCACTGTCAGCTCTCTCCTGTCTCATATTTAATGTGAGGAATCTGCCCTGACtcacaattaaaataataacaataatctcATCCATCTACAGCTTTGTGTTTACAGAATCGGTCTCTAGTCTAGAGTAATGATGACATTGAgcttcaaactttttttttaaatattgtgttGCTGTTTTAATGTGTCTGTAACAACTTCACAATAAGTATGATCCACCTTTCAATCACATGCCTaaggaaaacacaaacatgtactTAAGTAGACAGGCAAAAAGATCCTACTGACATTAAATGCAATAAGGAACAAGATAGGAGATCAATGTGTGTGGTCACAGTGTCATTTTACTGTGAATCTACACTATGTTCTCTTCTATATTTGGAAGTCATTGTTCATTATAAATGCAAAATGAGAAGTGCAAGGCTCAGAGAAATTTGATATCTTTAGTGTCTTTGTGTATCACAGGCTGGTCATTGTTAAAGGGGCATATGATAGAGAACAGGATGGTAAGCGTAGCTGAGCGTAGTCTCATCAAAACCTTTATTCTTgcagcattttttcatttaGCATTTCAGGGATGAGTGACACCATGATTCAATAGAGTCCATATATTATCATTTGAGAGTTTGAGTAGAAAATGAGAAGCCAGTTTCAAAGCAGAGGTGACTAAATTGAGAAGGGCAACAGTTTAGGTCATGTCTCAATCTATGTATTTCCTCCTTATTCAGGGAAAACGGAGTACAACTTCATTTGATAGAAATGGATAGCATTAAACAacctatcacttttttcatcatTGCACTCTTAAGAGCAGTAACAACTTCTGCATATTGTTAATATGGAGGTATTTAAATAAGCATTGGTGGAAGTAAATGAATAGATTTTGGGTATTATTGAAAGCTTCATCAAGAGGCATCCCATGCCAGAGACAGCACCAGGCTAACCACAGGCGTCCCTCACGTCAGGACAGCAGCTCAGACAACCGAGACTCATCAACTGTCTGTAATTCACCATTAAAGCAACAGCGGTTCTTTACAGGATTTGGGCTTATCTAGGCAGTCTGATGTGAAACCAGTTGGAAAGGACTGGATTTGGTAAATGTACCGTCTTCTTCTGGAGAACGTGTGAACAGGTGAGGTTTTCACCACAGCTACATTAAAAACCTGACCCTAACCTCAAGAATTTAAGATAAGACCTTCATGGAAGTCTCACTTACTGAACATCATATGCTCTTCCAATGTACCActgtacacaaaaaaaaaagatcttttaAAGAGAAATACTGGGAAATGggattatttatttcttttaatttattttgtcatatttttgtAAGACCTGAAAAATAGTTAATAAAACTATTTcaaatgca

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU128645 lncRNA upstream 222302 14368922 ~ 14369226 (+) True G95372
TU128557 lncRNA upstream 327642 14258285 ~ 14263886 (+) False LOC120565959
TU128779 lncRNA downstream 70179 14689382 ~ 14698562 (+) False LOC120565380
TU128778 lncRNA downstream 76479 14695682 ~ 14698562 (+) False LOC120565380
TU128781 lncRNA downstream 80347 14699550 ~ 14700145 (+) False LOC120565380
XR_005640293.1 lncRNA downstream 167865 14787068 ~ 14791606 (+) True LOC120565827
TU128805 lncRNA downstream 259879 14879082 ~ 14879287 (+) True G95492
XM_039812472.1 mRNA upstream 36608 14548589 ~ 14554920 (+) True plvapb
XM_039812080.1 mRNA upstream 47000 14537576 ~ 14544528 (+) True babam1
XM_039810587.1 mRNA upstream 92954 14480454 ~ 14498574 (+) True si:ch73-61d6.3
XM_039810588.1 mRNA upstream 92954 14482779 ~ 14498574 (+) False si:ch73-61d6.3
XM_039810581.1 mRNA upstream 112461 14469044 ~ 14479067 (+) False mfsd12b
XM_039810178.1 mRNA downstream 5076 14624279 ~ 14637054 (+) True abhd8b
XM_039811168.1 mRNA downstream 73301 14692504 ~ 14704353 (+) True LOC120565380
XM_039812299.1 mRNA downstream 191166 14810369 ~ 14912885 (+) False dennd1b
XM_039812295.1 mRNA downstream 191167 14810370 ~ 14923845 (+) True dennd1b
XM_039812296.1 mRNA downstream 191167 14810370 ~ 14919627 (+) False dennd1b
XR_005640172.1 other upstream 1208784 13379398 ~ 13382744 (+) True LOC120564964
TU128204 other upstream 1371156 13173025 ~ 13220372 (+) True G95046
XR_005640174.1 other upstream 1491083 13005576 ~ 13100445 (+) True raver2
TU127781 other upstream 3146995 11429031 ~ 11444533 (+) False LOC120565923
unassigned_transcript_388 other upstream 3342881 11248575 ~ 11248647 (+) True trnam-cau_8
TU128764 other downstream 155 14619358 ~ 14621413 (+) True G95460
XR_005640328.1 other downstream 191165 14810368 ~ 14916606 (+) False dennd1b
XR_005640329.1 other downstream 191165 14810368 ~ 14914033 (+) False dennd1b
XR_005640269.1 other downstream 1701291 16320494 ~ 16341048 (+) False kdm4b
TU129832 other downstream 3236434 17855637 ~ 17859152 (+) False nppc

Expression Profile