RNA id: XM_039810879.1


Basic Information

Item Value
RNA id XM_039810879.1
length 2395
RNA type mRNA
GC content 0.48
exon number 7
gene id amh
representative True

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 26027275 ~ 26031063 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GTGGGAGAATATAACGCCCTTCCTCATGAGCCATTCAAAACAAGCGATCGAGAAAGGTCTGACCACACAGGCACGTGTACAGACAGTGAAGTATGTTGTTTTTGGATGTCTTCTACTGTGGAGCGTTGATGCTCTGCTGCACCAGGCTCTGTGTGGCCCTGCATGTCTCCCATGGACAGCAGCTGATCCCTGCCCACCACCCCCCACTGACAGAGCACACCTTCCCACCAACAGAGACCTCGTCAGCCTCCACAGTCTCTCATCACGTCTTTCACAGCGCCCCATGCTTTGTGGATGACATATTCGCAGCGTTGTGTGAAGGCGTTGGGAGCGACGGTGAACTCACGAACCGCACTTTGACTCAGTTTGGAATCTGCATAGGATCTGATAGCTCATCAGACTCAGTCTTATTACAGCTTGCTAAGGAAACGAACAGAAACCAGAGAAACGGATTGGAGGTTTTGCATCCAACCGGAGTGCTCTTGGCAGAGGAAAATAAGAGAGGAATGCTCacgttgacctttgacctcccaCAGTCTCCTCTGATCAAGCTGAACCCTGTGCTGCTCTTGGCGTACGAAAGTCCTCTCACCGTGACCGGAGGAAACCTGGATGTCACTTTCAATGGTCAGTGGCTGCATCCCAATACACAGtCTGTATGCATTTCAGGAGAAACGCAGTACATCATGCTGACAGGATCAGCATCAGAGGCCAACAATCACCAGAAATGGAGGATTTCTGTCGAGACAAAAACCCCTGATATGAACCAAAGCCTAAAAGACATCCTTATTGGTGGAAAATCCGGAAGTAAAATCAGCATGACTCCACTTCTGCTTTTCTCTGGGGAAAGAGGAACCGATACAAGatatacacacacttcAGGTTCATCCCCGGCCTCTTCACAGACCTCCTTCCTCTGCGAGCTGAAGCGGTTCCTGGGTGACGTCCTGCCTCAGGAGCTGCCCGAGTCCACTCCGCTCCGGCTGGACTCCTTACAGTCCCTGCCTCCTCTGTCGCTAGGCCCTTCCTCCAGCGACACCCTGCTGGCAGGACTGATCAACTCCTCCTCCCAAACCATTTTCTCCTTCACTAGCCGGGGCTCCGTGGTTCAGGTGCATCGTGGAGAACTGGCCTTGTCTCCTGCACTGCTGGAGGAGCTCAGGCAGAGGTTGGAGCAGAGTGTGATAAAGATGATGGAGGTGAtacgggaggaggaggaggaggtgggtcATAGAGCCATGCCGAGGCTAGGAAGGCTCAAAGAACTCAGTACGTTTCCAAAGAAGGAACCGGCAGCAGGAGAGAGCCAGTACCGGGCATTTCTTCTGCTGAAGGCCCTGCAGACGGTGGCCCGTGCATATGAGTTGCAGAGAGGACTGCGGGCCACCAGAGCTGGCCCCAACAACCCAGAGGGGGGCAACATATGTGGGCTGAGGAGCCTCACTGTGTCTCTTACAAAGATTGTTACGGGTCCAAACACTGCCAACATCAACAACTGCCACGGCTCTTGTGCTTTCCCCCTGCCCAGCGCCAACAACCACGCCGTCCTGCTCAACTCCCACATTGGGAGTGGGAATGTGGACGAGCGGGCGCCGTGCTGTGTGCCTGTGGCCTACGAAGACCTGGAAGTGGTGGACTTCGCCGATTATGGGACTTCCATTACCATTAAACCAAATATGGTGGCAAAAGAGTGCGGATGCCGCTAAAgctgttttctttttgaagTGTAGTTAGTTGTGACTCAAAagatattttacatatttaacaGTCACTTCCCATGGCCTGTTTGACTTTTGCTGGCAAATGAGCGTGGGGCTCCGAGTGCTGGCAACGTGAAGGGAAAGCCAAACACCGTTCATCTGCGTATACTACCCACCCTACAATGACAAAAAGCTGGTTGAAAATCGACAGAGTTTGCCTTTAATTGTTACTTAACTGTAATTTATTCAATCACACGGTATCAATACACTGGTAGTAAATGCACATGTTAATTCACAGACATCTCTTTAAGCTATACTTTCACATATAAAGACAATGTCTTATTTGCATTATTCTCACACTTAGAACTAATCTTTTTTATTCAAAccaaaaaagttaaatatgAGTATTATCATCTCCCtctgtaaatatttcatttttattatctAAGAAGTCATTTGAATGAAAAGCCATTGTTTATTCAGGGCAGACCTCTTATCATCCACAAGACCACTTTTTTGTGCTTTAATTAAGATTTCAGTTATCATAGAAAGCATACCATACATGTCATGTCATATAAATCATTGTTCTGTACTTGTCTTAATGTCTGTATGTTTTAAAACTGTCCAAATGTCCTATGGCTTCATGTAACGTTTTAtgcaccaataaaaaaaaagaatatattgtTCTAAAACTA

Function

GO: NA

KEGG:

id description
K04665 AMH; anti-mullerian hormone

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU132643 lncRNA upstream 102225 25884516 ~ 25925050 (+) True G98312
XR_005640280.1 lncRNA upstream 189528 25786331 ~ 25837747 (+) True LOC120565749
TU132636 lncRNA upstream 189895 25786325 ~ 25837380 (+) False LOC120565749
TU132603 lncRNA upstream 286726 25739131 ~ 25740549 (+) True G98280
TU132490 lncRNA upstream 454400 25558113 ~ 25572875 (+) False G98196
TU132705 lncRNA downstream 3698 26034761 ~ 26039847 (+) False oaz1a
TU132719 lncRNA downstream 104174 26135237 ~ 26136630 (+) True G98363
TU132720 lncRNA downstream 104214 26135277 ~ 26136630 (+) False G98363
TU132754 lncRNA downstream 160805 26191868 ~ 26194089 (+) True G98384
TU132804 lncRNA downstream 261037 26292100 ~ 26292440 (+) False zbtb7a
XM_039810693.1 mRNA upstream 7904 25991506 ~ 26019371 (+) True dot1l
XM_039810694.1 mRNA upstream 7904 25991506 ~ 26019371 (+) False dot1l
XM_039810695.1 mRNA upstream 7904 25991507 ~ 26019371 (+) False dot1l
XM_039810696.1 mRNA upstream 7904 26002941 ~ 26019371 (+) False dot1l
XM_039810697.1 mRNA upstream 7904 26003062 ~ 26019371 (+) False dot1l
XM_039810881.1 mRNA downstream 3688 26034751 ~ 26039866 (+) True oaz1a
XM_039810190.1 mRNA downstream 19848 26050911 ~ 26053621 (+) True org
XM_039812390.1 mRNA downstream 66722 26097785 ~ 26135163 (+) True lingo3a
XM_039812389.1 mRNA downstream 67318 26098381 ~ 26135163 (+) False lingo3a
XM_039811849.1 mRNA downstream 112824 26143887 ~ 26189922 (+) True atp8b3
XR_005640198.1 other upstream 7904 25991506 ~ 26019371 (+) False dot1l
TU132604 other upstream 295098 25730258 ~ 25732177 (+) False slc35a3a
TU132486 other upstream 480186 25532825 ~ 25547089 (+) True G98194
TU132285 other upstream 1153401 24852301 ~ 24873874 (+) False elovl1b
TU132286 other upstream 1153401 24868017 ~ 24873874 (+) False elovl1b
TU132947 other downstream 761624 26792687 ~ 26795739 (+) False micos13
XR_005640192.1 other downstream 1996909 28027972 ~ 28084387 (+) False pip5k1ca
XR_005640167.1 other downstream 2106206 28137269 ~ 28146325 (+) False LOC120564865
TU133723 other downstream 2741325 28772388 ~ 28774510 (+) False LOC120565530
TU133929 other downstream 3632570 29663633 ~ 29665090 (+) True G99297

Expression Profile