RNA id: XM_039811561.1


Basic Information

Item Value
RNA id XM_039811561.1
length 2630
RNA type mRNA
GC content 0.48
exon number 5
gene id abhd17ab
representative True

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 25468399 ~ 25476235 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

CGGACGCGGCAGCGAAGAAGGAAAACACCGCACGTAGCTACTACATGGATTCATTGGAATGACAAGACGCCATCCATAAATTCCGAGGAGACGGCAGCACCTTCCAGAGTGGATTCATGAAGACGAATACACCCGTCGGAAACGATGTGTTAACGGTGTTTTACGTCGGGTGTCCGCGAATAAGcgttgttattattttttttactgagtagccgtgtttttgttttcttgctaGCTTAAGCCAGCGTAGCGTTAGCTGCTACGCTTGTCCTTATTCTTGATATATCACTCAATTAGTACAGGAGGAGACGGTGCTGTGCGTGTTTGATTGCGATTGACAAGCGTTCAGGATTTgctttttttggtcactttgcAAGGTAGACCGCTTTGGAAACGCTCGTTCCTCACTGTCAAAGACAAGTAAGTTACAAAAGTGATAGTTTACCTAAAAATATCCAGGGCACGTTTGGGGAAACAAACATTGTGTCTGAAGTGACTCGTCAACGTCTCAACAAATGGACAAAATGGATGTGATCTGGACTTCAGTCCCCACACAGGCAACACAGCAGATACTTTGTAAATAACACTTCCTTGTCAGTCTActactttctcctcctcctcctcctgctgacAGGGCAACTTTACAAACAGTATCCTGTTTTGGAATTTGACTGAAGTGGAGGAAGTCttccttgttttatttttgttttgggcGCAACTTCTTTTTGACTTTAACTTAGGCTAGGCTCTTCAGCTCAACAGTGAAGGATGAATGGTCTCTCTTTCGGCGAGCTCTGCTGCCTGTTCTGCTGCCCGCCCTGCCCCGGCCGCATCGCAGCCAAGCTCGCCTTCCTGCCCCCTGAGCCCACGTACGCCTTTCTTCCAGACCCAGAGGCAGTCCCTGCTGCACCTGGGGCAACGGGGACATCCAGCCTGCGGGCGCGGAGCATTGCATCAGTTGCTGGAAGCGGAGGGGCCGTGCCCTTGGATGGGAGGTGGAAGCTCCACCTGACAGAGCGAGCAGAGTTCCAGTACTCGCAGAGAGAGCTGGACACGACAGAGGTGTTCCTCACACGGTCCAGCCGAGGAAACCGAATCGGCTGCATGTACATTCGCTGTGTCCCTAATGCCAGATTCACAGTGCTCTTCTCCCACGGCAACGCCGTCGACCTGGGCCAGATGAGCAGTTTCTACATCGGCCTCGGCACCCGCATCAACTGCAACATCTTCTCCTACGACTACTCAGGCTACGGTGTCAGCACTGGCAAGCCCTCTGAGAAGAACCTCTATGCAGACATAGATGCTGCCTGGCACGCCCTGCGCACACGGTATGGCATCAGCCCAGAGAATATTATCCTGTATGGACAGAGCATTGGTACAGTACCCACTGTAGACCTGGCGTCACGGTACGAGTGTGCCGCCGTGGTTCTTCACTCACCTCTAACATCTGGCATGAGAGTGGCCTTTCCTGACACAAAGAAAACGTATTGCTTCGACGCGTTCCCCAACATTGAGAAAGTGTCCAAAATCACATCCCCGGTGCTCATCATCCACGGGACAGAGGACGAGGTCATTGACTTCTCCCATGGCCTGGCTCTGTTCGAGCGCTGCCCCAAGGCTGTGGAGCCTCTCTGGGTGGAGGGAGCGGGACACAACGACATTGAATTGTACAGCCAGTATCTGGAGCGCCTGCGCCACTTCATAGGACAGGAGTTGGCGGTACAGCACGCCTGACCGTCGCCACCAGGATCATCATCAACGTCATCATTACCATTTTTCCGTGTCCAAGATGGAGACGTGTCCAAGAGTCATCTCCCTCCGCTTACCACTGCTCCCGGGGCTTTAACGCTTCGCATACTGCAGTGCTTTATTCCCGGGGCACAGTACGCCTTTAATGGACCATGGTATGATGCGACATGGAGACAACAAGTGTGTTCATAAACTCCCGGAAGTGCGTGAGTGTGAAAATCTTCACAACTGCATTTTtagactgttttgtttttctttcttctttttctttttttagcagTTACTTTAACAGTACAGCTGCCATGTGTTACGTGGCAGCAAATATATTCCGATGCTGTGCAATAATACGGACAGTGTCCACAGGAAAAAATACTTCAAATGATTAAAAGGAGAtttaacacaacaacaaactcaTAAGTAATCATGTAGATCAATTACATTGTGGTCCGCATGAACATTTTCCATCAATTTTCCAGCCTACTCATAGTTTGTGTGTAACTTTTAATTGGATGGTTAAATGGTAATGGTGGAGAATGGGGAAACACTAAAGAAGACTCTCAAAAGTGCTTGTGACACCTGTTGGGGAATTTTTAAGTTTTCTCATGATCAGAATAGCAGGTTTGTAACTAAGTTCTCTGCGGTTTCTGTTAGTATGCCCTGTCCAATTTTTAATGCAATCCAAATTCAAAGCACTACAGCCGTGTTTccattcacacttttttttgcgTATTTCAAAGTTTTGGGATTCTTTTTTCAATAGGCCCAACCTAGAATAACAGaatccttaaaggaacacgccgacttattgggactttagcttattcaccgtaacccccagagttagataagtccatacatacccttcatatctctgtgttgta

Function

GO: NA

KEGG:

id description
K01076 ABHD17; abhydrolase domain-containing protein 17

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU132450 lncRNA upstream 209913 25253473 ~ 25258486 (+) True G98163
TU132401 lncRNA upstream 235999 25229382 ~ 25232400 (+) True G98123
TU132407 lncRNA upstream 276561 25191064 ~ 25191838 (+) True G98128
TU132293 lncRNA upstream 578023 24885420 ~ 24890376 (+) True G98033
TU132274 lncRNA upstream 592733 24837613 ~ 24875666 (+) True G98021
TU132466 lncRNA downstream 3113 25479348 ~ 25479604 (+) True G98177
TU132478 lncRNA downstream 35621 25511856 ~ 25512252 (+) True G98186
TU132480 lncRNA downstream 38815 25515050 ~ 25515742 (+) True G98188
XR_005640183.1 lncRNA downstream 44637 25520872 ~ 25521287 (+) True LOC120565050
TU132488 lncRNA downstream 81878 25558113 ~ 25560035 (+) True G98196
XM_039811667.1 mRNA upstream 1396 25458582 ~ 25467003 (+) True zgc:77486
XM_039811666.1 mRNA upstream 4956 25457253 ~ 25463443 (+) False zgc:77486
XM_039810770.1 mRNA upstream 11240 25444399 ~ 25457159 (+) False plin3
XM_039810767.1 mRNA upstream 11240 25444400 ~ 25457159 (+) False plin3
XM_039810768.1 mRNA upstream 11240 25444403 ~ 25457159 (+) False plin3
XM_039811164.1 mRNA downstream 125646 25601881 ~ 25613413 (+) True npl
XM_039811880.1 mRNA downstream 177627 25653862 ~ 25663704 (+) True sec22bb
XM_039811881.1 mRNA downstream 177627 25653862 ~ 25663704 (+) False sec22bb
XM_039810898.1 mRNA downstream 202301 25678536 ~ 25729476 (+) True notch2
XM_039811748.1 mRNA downstream 253990 25730225 ~ 25738789 (+) True slc35a3a
TU132285 other upstream 594525 24852301 ~ 24873874 (+) False elovl1b
TU132286 other upstream 594525 24868017 ~ 24873874 (+) False elovl1b
TU132257 other upstream 684518 24781918 ~ 24783881 (+) True G98012
TU131697 other upstream 1990581 23474782 ~ 23477818 (+) True G97596
TU131620 other upstream 2146490 23321522 ~ 23321909 (+) False pole4
TU132486 other downstream 56590 25532825 ~ 25547089 (+) True G98194
TU132604 other downstream 254023 25730258 ~ 25732177 (+) False slc35a3a
XR_005640198.1 other downstream 515271 25991506 ~ 26019371 (+) False dot1l
TU132947 other downstream 1316452 26792687 ~ 26795739 (+) False micos13
XR_005640192.1 other downstream 2551737 28027972 ~ 28084387 (+) False pip5k1ca

Expression Profile