Item | Value |
---|---|
RNA id | XM_039811584.1 |
length | 4400 |
RNA type | mRNA |
GC content | 0.44 |
exon number | 17 |
gene id | ssbp4 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_053120.1 |
NCBI id | CM020917.1 |
chromosome length | 41568296 |
location | 25840802 ~ 25937832 (+) |
genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
species | eurasian perch (Perca fluviatilis) |
id | name | namespace |
---|---|---|
GO:0003697 | single-stranded DNA binding | molecular_function |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
XR_005640280.1 | lncRNA | upstream | 3055 | 25786331 ~ 25837747 (+) | True | LOC120565749 |
TU132636 | lncRNA | upstream | 3422 | 25786325 ~ 25837380 (+) | False | LOC120565749 |
TU132603 | lncRNA | upstream | 100253 | 25739131 ~ 25740549 (+) | True | G98280 |
TU132489 | lncRNA | upstream | 232411 | 25558113 ~ 25608391 (+) | False | G98196 |
TU132490 | lncRNA | upstream | 267927 | 25558113 ~ 25572875 (+) | False | G98196 |
TU132705 | lncRNA | downstream | 96929 | 26034761 ~ 26039847 (+) | False | oaz1a |
TU132719 | lncRNA | downstream | 197405 | 26135237 ~ 26136630 (+) | True | G98363 |
TU132720 | lncRNA | downstream | 197445 | 26135277 ~ 26136630 (+) | False | G98363 |
TU132754 | lncRNA | downstream | 254036 | 26191868 ~ 26194089 (+) | True | G98384 |
TU132804 | lncRNA | downstream | 354268 | 26292100 ~ 26292440 (+) | False | zbtb7a |
XM_039812326.1 | mRNA | upstream | 56364 | 25769993 ~ 25784438 (+) | True | tmem59l |
XM_039812330.1 | mRNA | upstream | 85146 | 25748875 ~ 25755656 (+) | True | rex1bd |
XM_039811748.1 | mRNA | upstream | 102013 | 25730225 ~ 25738789 (+) | True | slc35a3a |
XM_039810898.1 | mRNA | upstream | 111326 | 25678536 ~ 25729476 (+) | True | notch2 |
XM_039811880.1 | mRNA | upstream | 177098 | 25653862 ~ 25663704 (+) | True | sec22bb |
XM_039812115.1 | mRNA | downstream | 916 | 25938748 ~ 25951039 (+) | True | fkbp8 |
XM_039811384.1 | mRNA | downstream | 13898 | 25951730 ~ 25983878 (+) | True | ell |
XM_039810693.1 | mRNA | downstream | 53674 | 25991506 ~ 26019371 (+) | True | dot1l |
XM_039810694.1 | mRNA | downstream | 53674 | 25991506 ~ 26019371 (+) | False | dot1l |
XM_039810695.1 | mRNA | downstream | 53675 | 25991507 ~ 26019371 (+) | False | dot1l |
TU132604 | other | upstream | 108625 | 25730258 ~ 25732177 (+) | False | slc35a3a |
TU132486 | other | upstream | 293713 | 25532825 ~ 25547089 (+) | True | G98194 |
TU132285 | other | upstream | 966928 | 24852301 ~ 24873874 (+) | False | elovl1b |
TU132286 | other | upstream | 966928 | 24868017 ~ 24873874 (+) | False | elovl1b |
TU132257 | other | upstream | 1056921 | 24781918 ~ 24783881 (+) | True | G98012 |
XR_005640198.1 | other | downstream | 53674 | 25991506 ~ 26019371 (+) | False | dot1l |
TU132947 | other | downstream | 854855 | 26792687 ~ 26795739 (+) | False | micos13 |
XR_005640192.1 | other | downstream | 2090140 | 28027972 ~ 28084387 (+) | False | pip5k1ca |
XR_005640167.1 | other | downstream | 2199437 | 28137269 ~ 28146325 (+) | False | LOC120564865 |
TU133723 | other | downstream | 2834556 | 28772388 ~ 28774510 (+) | False | LOC120565530 |