RNA id: XM_039812094.1


Basic Information

Item Value
RNA id XM_039812094.1
length 6935
RNA type mRNA
GC content 0.47
exon number 12
gene id abl2
representative False

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 22501548 ~ 22529009 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

TTATGCTAGACACCGCAGGCCTCTGTGCGTACAGCAAGTGATAACAGTGTTCCTCAGAGAGTGGATCGGTTAAAGTAATGCTTTTGAGGTGCCTGCAggcaaacagcagttttgagGAAGAGTGGACGGCTCTGAGCGGCCGTCATCGCCACACAGGGTTCAGGCAAGAGAAACAGCCTGGACTGACAGaAGCTCTCCACCGGCCGTTCGGCCTGGACTCTGCAGCGCTGACGGAGGCAGTGCGCTGGAGCTCCAAGGAGAACCTGCTGGGGGCGGCCGAGAGCGACCCTAACCTCTTCGTTGCACTTTATGACTTTGTCGCCAGCGGAGACAACACGCTCAGCATCACTAAAGGTGAGAAGCTGCGTGTGCTGGGCTACAACCAGAATGGAGAGTGGAGTGAAGTGCGCTCTAAGAACGGCCAGGGTTGGGTGCCCTCCAACTACATCACGCCTGTCAACAGTCTGGAGAAGCACAGCTGGTACCATGGGCCCGTGTCACGCAGCGCCGCTGAGTACCTGCTCTCATCCCTCATCAACGGCAGTTTCCTGGTCCGGGAAAGCGAGAGCAGCCCCGGACAGCTGTCGATTTCTCTCCGCTATGAGGGAAGAGTCTACCACTACCGAATCAACACAGCCTCTGATGGAAAGgTGTATGTGACGTCTGAGAGCCGTTTTGCAACCCTGGCCGAGCTGGTCCACCACCACTCCACTGTAGCCGATGGCCTGGTCACCACCCTGCACTACCCAGCCCCCAAATGTAATAAGCCCACAGTGTACGGTGTGTCACCCATCCACGACAAGTGGGAGATGGAGCGcacagatatcaccatgaagcACAAGCTGGGAGGAGGCCAGTATGGGGAGGTGTACGTGGGAGTGTGGAAAAAGTACAACCTCACGGTGGCTGTCAAGACACTGAAGGAGGACACCATGGAAGTTGAAGAATTTCTGAAAGAAGCAGCAGTTATGAAGGAGGTTAAACACCCAAACCTCGTTCAGCTACTAGGTGTGTGTACGTTGGAGCCTCCGTTCTACATCGTGACAGAGTACATGCCACACGGCAACCTACTGGACTACTTGAGAGATTGTGACAAGGAGGAGGTGAACGCTGTGGTGCTGCTGTACATGGCCACTCAGATCTCCTCTGCCATGGAATACCTGGAGAAGAAGAACTTTATACACAGGGACCTTGCAGCGAGGAACTGCCTGGTTGGAGAAAATCATGTTGTGAAGGTTGCAGACTTTGGCCTGAGCAGGTTGATGACTGGTGACACCTACACTGCCCATGCAGGGGCCAAGTTCCCCATCAAGTGGACTGCACCAGAGAGCCTTGCATACAACACCTTCTCCATCAAGTCAGATGTGTGGGCATTCGGGGTGCTGCTGTGGGAAATTGCCACCTATGGCATGTCTCCATACCCTGGCATTGATCTGTCTCAGGTCTATGACCTCCTGGAGAAAGGTTACCGCATGGAACAGCCCGAGGGATGCCCACCCAAAGTCTATGAACTCATGAGAGCATGCTGGCAGTGGAGCCCATTGGACCGGCCTTCATTTGCAGAGATCCACCAAGCCTTTGAAACAATGTTCCATGACTCCAGCATCTCTGAAGAGGTAGCAGAGGAGCTCTGTAAGACGGCCTCTTCTGGTCACTGTGGACCACTGCACCCTTTCAGTCACGACATGCCCCTGTTGCCTTCGAAATCTCGCACACCCCACAAGCACACAGAAAACAAGGAAAACATTGAGGGTGGACTCGACGGACGATCTGACCACGGCACGCACAGTCATTCAGAGAGAACCATGCCAAGCTGGGCTTCTGCTTTGTTAGGAGGGGATGGCCGATCAGGCAGCTCTCCGGCTCTGCCCAGAAAACAGCAAGCACGAGATAAATCTCCCGGCAGCATTTTAGATGATGCGCAGGATATGGGAACATTTACACGGGATCGCAAGACTGGCTTCTTTAGCTCCTTCATAAAGAAGaaatcttcctcctcttcttcctcctcaccaTCCTCTCAGCTCCAACAGAACCTCCCGACACCACCCAAGAGGAGCAGTTCTTTCCGGGAGATGGAAACGCAGCCTCACAAGAAATATGAGCCTACTGCTGACTTCagcgctcctcctcctctacccCAGTCTGATAGCCTTGGTGGTTTCTCCGCCTCTCCCTCTCACTCCCATGGTGAACCTACCCAGGCTCAGTCACGCTGCTGTGGGGCCGCTTTTGGACAGAAACCCTCTGGTGGCGGGCTTGCTTCACAGGTGACGGGTGGCAGCAGTTGGAGTGGGTTGGCTGGTTTTTTTACCCCTAGACTCATCAAAAAGACACTGGGCCTACGGACAGGGAAGACAGCCTCTTCAGAGGAGGGTGGAAGTATAGCTGGAGGGCCTAAACCCTTCCCTAGGTCCAATTCTACCTCCTCCATGTCAGCAGGGCTGCCAGACCTGGAGCGCATGGCTCTGACTTTACCCAGGAACCGCAGTGCTAAACCCCCTCTAGAGAGGACTGCCTCCACAACCTCCCAGCCAGAGAATGGCGCTGCACGGCCCTCAGAAACTCTGCTGAGGAGGCTGGATGAGGGGACTGCACAGATCAGGGAAAGGCCCAAAGCCAAGCTATTACCCCGGGGCGCTGCTGTAGGGGTGAGGGCACCAGGGGTtgggggggaggtgggggaATCGGACAGTCTGTCCCGGGTCAGGGAGGTTAGAGAGGAGAGTGTTGGAGGACTAGATCGACAGCAGAGTTGGTCATCTCCCTCTAAGACTTGTAGTTTGAGTGCTTCATCAGCTGCAGCAGGTGCACCAACTCACAACCACAAAGTTCCAGTCCTCATCTCCCCCACGCTGAAACATAGCCCAGCTGATGTGCACTTAGTAGGGCTAGACTCTCAGGGGAACCGCTTCAAACTGTTGTCTGAGCACCAAACGGACCGGGACAGGCCGCGACTTGTAAAACCCAAGTGtgctccccctccccctcccaccCTGCGCAGCCTGCAACACTCTTACAGCGGCGACGGAGAGGAGCAGGTAGGAGGAGCGCCTGTGGAAGTAAACGGAGACACTTTGAAAGGTCACCGATTAGGGCGAATGTCGGGAGGAGCGATGACAGGCAGACCGTCAGTGCCACCACCACAAGTGCCTCCTGCATCTTCCTCCACCTTTTCCTCATCTTGCTCTGCCACCACCAACACGACTCCCACCACAATGGCCAACGGAGCCGCCATCACTGCCGCCTCGTCACACACAGCACCGTCTGCCGGTTCCAAAGTGGCACTGCGGCGGACCAGGCAGCAGGCAGAGAGGCTGCCCCTGGAGCGAGTGAGTCGTGAGGCCCTGTTGGACTGCGCGGAGTGCCTGAGCAGCGCCCTCCACGCCAGTTCCGAAAGCCCCTCCAGCAGCCAGGTGCTGGACGCTGGCCACCAGCTGCTAGACTACTGCTCAGGTTATGTGGACTGCATCCCTCAGATGAGGAACAAATTTGCCTTCCGAGAGGCAGTGGGAAAGCTGGAGCTCAGCCTGCAGGAACTGAGGGCCTCGTCCTCAGGAGGTGGGCTGAGCGGTGTGGGGCCCAACACTGTACTGGACAACCTGCAATGCTGTATTAAAGAGATTAGTGACGTAGTACAGAGGTAGCCACTGTGACACCACCAACCGTCACCCCTGACTACACGACAGAATGCTTAtattcccttttttttatttttcagattcTTTTGACAGCTTTTTGGGGGACGAAATGAGATGAATCTCTAAAGTACCTCAGAGAAATCACTACAAAATCTATTATTTTTACTGTTTACAAACAACTGTTTCATAAAATGCCAGTGTGGACACTAATTTTGCTCTGACCTGTACATATTCAGAAATGTTTATACCAAATTAAATGTGGTTTAAGTCACACCATAAAATGTTTAGCTCCATGACTCCACCTGGCCATGATAAAAGCctctttgttaaatgaatgtCAAGTGTATCAGCTGTGTGTAGCCAGCCCAGAGAGTAGGTAAAGTCGAAGCTCACTCTGCTTATCTCTCACTCTGTCACATACTGAGCAAGAAAGATGGTGGCTGTGCTCAGCCTTACTGAGAATACTAGACAACTGTTTTCACTGACCCAGCTCGAACAGTGTTTTACAAATGAGTGAATCATCAGTTGGGTGCACTGCGTTTTGCAGTAGAGTGTTTTGCTCAGTGTCTGGGAAACTGAGTGACCataagccatttttttttaaagccattgTATTCTAAAGGATCGGAAACATCATCAGGATTCAAGGTTTTGGGGTCTCAATTTGACACTTTTATTCTGtgtgcagatgtttttttttcttattttcattttattttcatgaccatCTGTATTTTTAAGAAGATCGACAAATGTGATACAATTATAAATCTCCCCAAAACTGCTTTTGTTGTTATAAGTTTAAAGCCTTGTTTTTTAGAGAATAATCCAACTGTTTTGGTGCAGACATTCCCACGTGTCCACACAAAGTGACTGTCGAGAAAGACTGAAGGGATCACTTACATCATTGGCAAGTTGTGTGCATTTATTTGACAAGTGTGTAAATAAGCTTAAAGAAACGTGTACGTTTCAGTTTTGCCAAATACAGGCTTatcaaatctataaaaaaaaaaagatttatatgaatctattttatttattccccACAATACTAAAACATGATGAATTAACGTAGGGTGTCTCATCATATGCACAGCATTTGTCTTCGCTTCAATGACGTGACTCATGTTCACACCTTAACACAGTGCCACATAAATGGGGAAATTTGCCAGTCTCCTAAAGCATTTCAATATTTATGTCCAGTTATTTTTGCACACGGAATTTCTTCCTTGTGTGATGGAATATAAAAGAGTGGAGGATAGGGGAGGGGAGAGCACAGGGTAGCGCATGTGCAGGTGAATTGGGACAGTAGTTCTATAAGTGTCCTTCTGAGTACGGACAGTGCTGGATTCCCTGAAGCCTTGTCGTGTCCTCAGTGCCTCAAATTCTTCCATGTGTGAACACTGCGAAATGCAGAGACCTACTTTACACTAATCACACAGTACCAATCTCTCAAAAAGCAAACTGCAGTATGTCTTCAGCACATGAGCGATTTGTACATTATTTGGTTCAAAGTAAAATGCTTTTTAGAATGTCTATGTATGAACTTGAATTTTAAattattcctgtttttttttttcttcttttttaattaaaagcaCAGACctattttgagagaaaaagttatgtaaatatttgatttatttcatATCCAGGAATCAAAAGATGTATGTGTGGTCACAGCATAAAGAGCAATGTTTTTGACTGAAGAGATGTACCGCATAAGACTGAGGCTCCTCCACCCAGATCTGAATATCTGCTTTATGAATGTATTATTCTTCCGTTCTGAACCCGGTCGAATATTCATCTTCATGACTCTTTTGATCTCTTAAGGTGCcatcttttattatttattgtaatttttttaatggccCCATTTCTAATTTTGGTCACACTAAATAATTAAGTTCAGAAACTTTTTTTGAGcacaaacaaaactacagcGCACACAACTCACAcaactttctttgttttggcgcACATCTTAATGTACACTGGATAAGGCCTCAGACACATTGGTTCAATGACACATATGAAAACTACAAAATCTAATCTATAAACACTGCAGGTCCATAACACTTTCAAAATGCCTGTTAATGACACTTGATGGATTGCCAAGTAAACTTTTGTCAACTTGTGTTGTGGTGCATTACGTATCATCATTTCATGTTGTGTGTCAGTATTTATGTCCAGTTTAATGCCAAACAGGATCCTGTGAGACAAACCTGATGATTTAATTCTATTCACTGTGAGTTTCAAATAACAcgggcaacaacaaaaaaaatgcatcaaTCATCTTTTCTTTCATGACTCTTGGTGCCTTTTGTGAACAAGTGattatacacatacagtacagtatcactGCAAGAACTCACAGGTATGGAAATATTAAATGTCCATCATTAAACactaatttcttttctttcctttaccATGAGATTGTGATAAGCATATCACTACAGCATGTAATTTGGAGGTCAGATGCAAACTTTAAACTGAAAGGTGCACTTTGTCTATGAAGATTATGTATTTAGATACTCAGTTACTAAGGCCATGTATTAGTGTCCATTAACACTGTGAGTGCAGCCACATCTGGTTATGTTTCCTCTCTAACAAAAGGCACATGAGTCTGCTGCACTAAACGCAAGCTGCTCTGTTGTCTCATAATCTGGCCCCATCAGAGGTTTTGTCTAAAAAATGAAGTTTCTGTTGATTTGtagtgcatccctgtggagcaGGTTTCCCCAAAAGCCTTATCAAGAAAACATTTACCACATTTCCACTCTGGgctgtttttaaagaaataaaacatgtagATATTCAATCAATAATTACAGAGTCAACTGATTTATTTGATACCCATGTGTTTTCCTCAAATCTGATATTGGAACTGACCCTGTTTAATATTTGAACTGACCACAAATGTCTTCTTATTCTCATTGTCAGTCTTCTGCATTGTCTTTATGTTGGCTGCATTTATCCTGTATATCTGTTTTCCCCCCCTCCTGTCTCTGTTATGGAGAACAGCTTTGGAGAATGTGTGTACACATCATTATACCAAAGGCCACTTCTTCAGTTGTACGAGTGCAATGTAAaccaacacacaaaataatgGAATATGTGAATCTAAAACAGGGATAAAATGGCAGAGATGTTATCATTAACTTTTTTActgtacaaaatatatatattttgtgtttttgttttgttttttatttaaagctcaCGTTATATTACTGTGAAGTTTTGCTTATCAGTGTTAAGCCTATTGTAAATAATAAAGATATTGATCAA

Function

GO:

id name namespace
GO:0018108 peptidyl-tyrosine phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004715 non-membrane spanning protein tyrosine kinase activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU131333 lncRNA upstream 191843 22322492 ~ 22322855 (+) True G97338
TU131330 lncRNA upstream 198340 22313648 ~ 22316358 (+) True G97335
TU131289 lncRNA upstream 340305 22158057 ~ 22174393 (+) True G97297
TU131286 lncRNA upstream 356740 22156111 ~ 22157958 (+) True G97295
TU131249 lncRNA upstream 421324 22091389 ~ 22093374 (+) True G97263
TU131429 lncRNA downstream 42745 22571754 ~ 22576548 (+) False LOC120566218
TU131431 lncRNA downstream 42786 22571795 ~ 22576548 (+) True LOC120566218
TU131439 lncRNA downstream 65487 22594496 ~ 22595277 (+) False G97410
TU131438 lncRNA downstream 65778 22594787 ~ 22595277 (+) True G97410
TU131444 lncRNA downstream 128490 22657499 ~ 22676178 (+) True rnf11b
XM_039812090.1 mRNA upstream 13683 22492957 ~ 22501015 (+) True soat1
XM_039812089.1 mRNA upstream 13683 22492957 ~ 22501015 (+) False soat1
XM_039811777.1 mRNA upstream 23463 22485511 ~ 22491235 (+) True LOC120565764
XM_039810184.1 mRNA upstream 29538 22458461 ~ 22485160 (+) True si:dkey-21p1.3
XM_039810182.1 mRNA upstream 60701 22360531 ~ 22453997 (+) True LOC120564914
XM_039812096.1 mRNA downstream 1078 22530087 ~ 22570300 (+) False osbpl9
XM_039812097.1 mRNA downstream 1078 22530087 ~ 22570300 (+) False osbpl9
XM_039812099.1 mRNA downstream 19884 22548893 ~ 22570300 (+) True osbpl9
XM_039812098.1 mRNA downstream 24552 22553561 ~ 22570300 (+) False osbpl9
XM_039810961.1 mRNA downstream 48188 22577197 ~ 22582655 (+) True tor3a
XR_005640308.1 other upstream 13683 22492957 ~ 22501015 (+) False soat1
XR_005640282.1 other upstream 26595 22485511 ~ 22488103 (+) False LOC120565764
TU131315 other upstream 227426 22283646 ~ 22287272 (+) True G97321
TU131036 other upstream 732698 21690897 ~ 21782000 (+) True G97093
TU130185 other upstream 2983021 19530767 ~ 19531677 (+) True G96513
XR_005640352.1 other downstream 43050 22572059 ~ 22572139 (+) False LOC120566218
XR_005640361.1 other downstream 43460 22572469 ~ 22572551 (+) True LOC120566227
XR_005640356.1 other downstream 43714 22572723 ~ 22572804 (+) True LOC120566222
XR_005640353.1 other downstream 44158 22573167 ~ 22573247 (+) True LOC120566219
XR_005640360.1 other downstream 44621 22573630 ~ 22573692 (+) True LOC120566226

Expression Profile