RNA id: XM_039812096.1


Basic Information

Item Value
RNA id XM_039812096.1
length 3829
RNA type mRNA
GC content 0.47
exon number 24
gene id osbpl9
representative False

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 22530087 ~ 22570300 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

CCGGCGACTCCTCCCCAACCGTAGCCTATTGTAAAGATGGCGTCCATCATGGAGGGGCCGCTAAGTAAGTGGACTAACGTTATGAAAGGTTGGCAGTACCGTTGGTTCGTTTTGGACTACAATGCCGGCTTGCTGTCGTACTACACGTCAAAGGACAAGATGATGCGAGGATCCAGAAGAGGCTGCGTGCGACTCAGGGGAGCTGTGATCGGCATTGATGACGAGGACGACAGCACATTCACCATCACTGTGGATCAGAAGACTTTCCATTTCCAAGCCCGAGATGCAGACGAGCGGGAGAAATGGATCCATGCCTTAGAGGGAACTATCCTCCGTCACACCCTCCAACTCCAAGAGGCCGAGACAGGATTTGTTCCGAGTGTTCAAGACTTTGATAAGAAGCTAGCTGAAGCTGACGCCTACCTACAGATTCTGATTGACCAGTTAAAGctgtttgatgagaagatcaaGGACTGCAAAGAGGATGAATCACGCAGAAAAATTGAAAATTTGAGGGAGACTACTTGTagcATGGTAGAGTCCATCAAGCACTGTATTGTACTGCTGCAAATCGCCAAGGACCAAAGTAACGAACAGCAACACGCAAACGGACTTATAaGCACCATAAACCCAGTGGATGGGATCTACCAACCCCCTCTGGACCCTCCTGTAGTCAACACCACGATGCCAACACAGACCACACTACCCACAGACGCTTCTCAGGTGTGTAAATCCGACCAACGCCCCTCCACGTTACAAGTTGGTCCCATTGTCACGGTGATGGGCAGTCTGCAGACCCCAACTCCCAACAGCACAGgGAGTGGCCAGTCAGGCCCCAGCAGCAGCGTCGCCTCCCCGTCTCACATCCCCCTCCTCTCGCACTCGGTGCCAGACTTCTCCTATTCCTCCAGCGAGGATGAGTTCTACGATGCTGATGAGTTCTACCAGAGCAGTACTTCCCCCAAACACTGCATAGATCCCTCAGGGCCTCAAGCGTCCTCACCTCTCACTAATGAAGCAACAGCGTTGAAACGACCAGACACCACCGAGTCCCTCAACTCGTCCATGTCTAACGGCACAACAGATGCAGACCCGTTTGACAGCCATGATGACCGCGATGATGAAGGTGAGGGCGAGTCTGTGGAGGAGCACAAGAGCGTCATCATGCATCTTCTCTCTCAAGTTCGTTTGGGCATGGACCTCACCAAGGTGGTACTGCCTACCTTCATCCTGGAGAGGAGATCTTTGTTAGAAATGTACGCCGACTTCTTTGCACATCCCGACTTATTTGTAAGTATCGCTGAGCAGCCGGAGGCCCGGGAGCGCATGGTTCACGTGGTAAAGTGGTACCTGTCAGCTTTCCACGCAGGGAGGAAAGGTTCAGTGGCCAAGAAACCTTACAACCCAATCCTGGGAGAAGTCTTCTACTGCCACTGGGATCTGCCCAGCGACACAGAGGAGCCTTCCCCGCACACGGAGACAGTATCAGAAGGTCCAGTACCATGGTCTTCATCCaacagtgtgtgttttgtggcaGAGCAGGTCTCTCACCACCCACCCATTTCTGCATTCTACGCAGAATGTTTAAATAAGAAGATCCAGTTCAACGCTCACATCTGGACTAAGTCTAAGTTCTTGGGCATGTCCATAGGTGTCCACAATATTGGCCAAGGTTGTGTGTCGTGTTTGGAGCATGATGAACATTACATCCTCACCTTCCCTAACGGATATGGCAGGTCGATTCTGACTGTGCCGTGGGTGGAGCTGGGTGGGGAGTGCAACATCTCCTGCTCCAAGTCGGGCTACAGTGCTAACATCGTGTTCCACACCAAACCCTTCTACGGAGGAAAAAAGCACAGGATCACTGCTGAGATTTTttcaCCTAATGATAAGAAGTCTTTCTGCTCCATTGAAGGAGAATGGAATGGAGTGATGTATGCCAAGTGGGCAACTGGAgaGAACACAGTGTTCATAGACACTAAGAGGATAGGCATCATTAAGAAGAAAGTGAGAAAGCTGGAAGACCAGCTCGACTACGAGTCCCGAAGATTGTGGAGAGATGTGACGTTGAACCTGAAGCAAAGGGACATTGATGCAGCAACAGAAGCCAAACACCGGCTGGAGGAGAAACAGAGAGCCGAagccagagagaggaaggagaacgAGCAGCAGTGGGAGACCAGGCTATTTCACGAGGACGGGGAGTGCTGGGTCTATGATGAGCCTCTATTAAAGAGATTAGTCCCTCAGAGGCACTGAGAGGACTACGCACAttctgatgcacacacacacacacacacacacacacacacacacaccatacataTGCATAAAGAACTGCACACACAACAGAGTCTTCATAAGAACTCTTTTGCAAAACCACTTCTTTTCCAAGCCTTGGAATGACTGACTTATGATTGAATATGTACACAACTTTGCATTTGACTGTAAAACAATATGGAAATGAATGAAATCAAACGGAAAAGCGTCTGAGATGTAACTTGAAAACTAGTAAAGCTCCTCTTCTTATTTGGGCAACATCACTTCCACCGCCAGCACGAGAGTCGGGAGCGCAGAGTGGAGACGGGAGGTCGACTCTTCTCAGCTCTATCCGTCAGCTCCACGACCACACCCTTCATCAGCTCCATGGGACGAGCAAGAGCAGCACTCATTTccttacacaaacatttttgttttggggGGCAAGGGGGTGTGGTTGATGGTGTTGAAATCAAATAAACCTTGACAAATAAACGGGCGCTCTACATCTCAGGGAATCTGGTGACTTAAGAAAGAAAGCTGCTGCCCCCTCTGAGAGTCTGACAGCCTTATAACAGTGGAAGGGATGAATCTTAAAGGGGTGGGGGAGAAATTCTCCGCTTGCCTGCAACTAGTTGTAACTgtttatatatagatatacatatgatggatatataaatatatattcttttttattttcaatgctctttttgtttgtttttctttctggcaatagtgtaaaaaatatttgaggATATGAATTTGATCTTTAGGAATCATTCCATTTACCCTTTTGGTGTTTTGTTCCCATTTTAAGTTCACTTTGCTGCTTATTTGGTCCTTCGCACGGTTCTGTGTCTCAAGTGTTATCCAGAAGCAAAGCCCTACATAAGCCATAGCATCTCAACTCACTGATTGGGAGAGTTGTGATAGATTTGTGGAATATATGCAATCTAGAGAACATTGACATTGCCTGTCAAAGGACAAATTTGGGTGTCCATTATGCCAAAAATGTTTAGATAAAAGGCTAAAGGGACTTTCATCTGGGCAAAGAACAAACAACCCTCATGTTTCCATGTTACCTGAAGGCATTTATAAACAAATAAGTGTTTTACATATGTTTGTCTTTATGGATCGCTGGTTCATGATGAGGACGTAAGGCTAGGACTAAGTCTGTAAAGTCTCCCTTTTTGTTCTTCACGTCGCCTGTCCGTGTTTCCTGTCCAAACCCACAGATTTCAGAGTAGATCACCTTGATGGTTCACCTGTTGTCAGAGGGTGAGGACAGTGAAAACAAGGAACCGGAGTAGACTTTTGAAacactgatgctgttttcatagtCCTGCTATGAATCCAGACTGTGTTCTACTGGTTCTGTTTTCTTGTAAACTCAATTTTTTTGTCCAATGTTTTTTGAGATAACCACATAGAGGGCAATATTAATCCTACTGTACACCTCTGCTTTCTGAAACCATCATCCATTCTCTTATTTACAGCTGCATAGGTTGGATCTAAATGCAATGATATTTGgatgaaatacagaaataaacaattttCACATGAAAACGCA

Function

GO:

id name namespace
GO:0006869 lipid transport biological_process

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU131333 lncRNA upstream 207232 22322492 ~ 22322855 (+) True G97338
TU131330 lncRNA upstream 213729 22313648 ~ 22316358 (+) True G97335
TU131289 lncRNA upstream 355694 22158057 ~ 22174393 (+) True G97297
TU131286 lncRNA upstream 372129 22156111 ~ 22157958 (+) True G97295
TU131249 lncRNA upstream 436713 22091389 ~ 22093374 (+) True G97263
TU131429 lncRNA downstream 1454 22571754 ~ 22576548 (+) False LOC120566218
TU131431 lncRNA downstream 1495 22571795 ~ 22576548 (+) True LOC120566218
TU131439 lncRNA downstream 24196 22594496 ~ 22595277 (+) False G97410
TU131438 lncRNA downstream 24487 22594787 ~ 22595277 (+) True G97410
TU131444 lncRNA downstream 87199 22657499 ~ 22676178 (+) True rnf11b
XM_039812091.1 mRNA upstream 1078 22501548 ~ 22529009 (+) True abl2
XM_039812093.1 mRNA upstream 1078 22501548 ~ 22529009 (+) False abl2
XM_039812092.1 mRNA upstream 1078 22501548 ~ 22529009 (+) False abl2
XM_039812094.1 mRNA upstream 1078 22514698 ~ 22529009 (+) False abl2
XM_039812095.1 mRNA upstream 1078 22514698 ~ 22529009 (+) False abl2
XM_039810961.1 mRNA downstream 6897 22577197 ~ 22582655 (+) True tor3a
XM_039810960.1 mRNA downstream 13906 22584206 ~ 22589319 (+) True calr
XM_039812081.1 mRNA downstream 21343 22591643 ~ 22623535 (+) True eps15
XM_039812083.1 mRNA downstream 21343 22591643 ~ 22623535 (+) False eps15
XM_039812082.1 mRNA downstream 21343 22591643 ~ 22623535 (+) False eps15
XR_005640308.1 other upstream 29072 22492957 ~ 22501015 (+) False soat1
XR_005640282.1 other upstream 41984 22485511 ~ 22488103 (+) False LOC120565764
TU131315 other upstream 242815 22283646 ~ 22287272 (+) True G97321
TU131036 other upstream 748087 21690897 ~ 21782000 (+) True G97093
TU130185 other upstream 2998410 19530767 ~ 19531677 (+) True G96513
XR_005640352.1 other downstream 1759 22572059 ~ 22572139 (+) False LOC120566218
XR_005640361.1 other downstream 2169 22572469 ~ 22572551 (+) True LOC120566227
XR_005640356.1 other downstream 2423 22572723 ~ 22572804 (+) True LOC120566222
XR_005640353.1 other downstream 2867 22573167 ~ 22573247 (+) True LOC120566219
XR_005640360.1 other downstream 3330 22573630 ~ 22573692 (+) True LOC120566226

Expression Profile