Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_039812520.1 |
| length | 1298 |
| RNA type | mRNA |
| GC content | 0.57 |
| exon number | 5 |
| gene id | prrx1b |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_053120.1 |
| NCBI id | CM020917.1 |
| chromosome length | 41568296 |
| location | 4966559 ~ 5000440 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0006355 | regulation of transcription, DNA-templated | biological_process |
| GO:0007275 | multicellular organism development | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0043565 | sequence-specific DNA binding | molecular_function |
| GO:0003700 | DNA-binding transcription factor activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU125935 | lncRNA | upstream | 22614 | 4943645 ~ 4943947 (+) | True | G93350 |
| TU125937 | lncRNA | upstream | 22614 | 4943645 ~ 4943947 (+) | False | G93350 |
| TU125934 | lncRNA | upstream | 27151 | 4939148 ~ 4939410 (+) | True | G93349 |
| TU125930 | lncRNA | upstream | 72855 | 4893318 ~ 4893706 (+) | True | G93345 |
| TU125920 | lncRNA | upstream | 161329 | 4798411 ~ 4805232 (+) | True | G93335 |
| TU126066 | lncRNA | downstream | 58907 | 5058606 ~ 5100316 (+) | True | G93431 |
| TU126067 | lncRNA | downstream | 62628 | 5062327 ~ 5100734 (+) | True | G93432 |
| TU126108 | lncRNA | downstream | 328286 | 5327985 ~ 5328233 (+) | True | G93448 |
| TU126099 | lncRNA | downstream | 353645 | 5353344 ~ 5407242 (+) | True | G93439 |
| TU126101 | lncRNA | downstream | 400432 | 5400131 ~ 5411358 (+) | True | G93441 |
| XM_039812508.1 | mRNA | upstream | 20254 | 4934761 ~ 4946307 (+) | True | gorab |
| XM_039812521.1 | mRNA | upstream | 93205 | 4852948 ~ 4873356 (+) | True | mettl11b |
| XM_039812507.1 | mRNA | upstream | 182410 | 4714655 ~ 4784151 (+) | True | niban1a |
| XM_039811513.1 | mRNA | upstream | 253328 | 4685224 ~ 4713233 (+) | True | trmt1l |
| XM_039811614.1 | mRNA | upstream | 305124 | 4657761 ~ 4661437 (+) | False | LOC120565686 |
| XM_039812496.1 | mRNA | downstream | 24811 | 5024510 ~ 5201873 (+) | False | LOC120566192 |
| XM_039812497.1 | mRNA | downstream | 37292 | 5036991 ~ 5201873 (+) | False | LOC120566192 |
| XM_039812495.1 | mRNA | downstream | 37690 | 5037389 ~ 5201873 (+) | False | LOC120566192 |
| XM_039812491.1 | mRNA | downstream | 126799 | 5126498 ~ 5201875 (+) | False | LOC120566192 |
| XM_039812488.1 | mRNA | downstream | 126799 | 5126498 ~ 5201874 (+) | True | LOC120566192 |
| TU125908 | other | upstream | 253376 | 4711561 ~ 4713185 (+) | False | trmt1l |
| TU125644 | other | upstream | 669151 | 4284902 ~ 4297410 (+) | True | LOC120565391 |
| XR_005640230.1 | other | upstream | 672671 | 4290341 ~ 4293890 (+) | False | LOC120565391 |
| TU125669 | other | upstream | 748735 | 4196824 ~ 4217826 (+) | True | G93150 |
| TU125177 | other | upstream | 1359736 | 3600978 ~ 3606825 (+) | True | G92848 |
| TU126315 | other | downstream | 1035670 | 6035369 ~ 6040119 (+) | False | G93613 |
| TU126347 | other | downstream | 1202386 | 6202085 ~ 6214017 (+) | True | G93638 |
| TU126420 | other | downstream | 1355198 | 6354897 ~ 6368354 (+) | False | rhpn1 |
| TU126750 | other | downstream | 2350111 | 7349810 ~ 7350587 (+) | True | G93938 |
| TU126885 | other | downstream | 2898973 | 7898672 ~ 7905247 (+) | False | LOC120565614 |
