Item | Value |
---|---|
RNA id | XM_039812531.1 |
length | 3677 |
RNA type | mRNA |
GC content | 0.46 |
exon number | 24 |
gene id | oca2 |
representative | False |
Item | Value |
---|---|
chromosome id | NC_053120.1 |
NCBI id | CM020917.1 |
chromosome length | 41568296 |
location | 40206026 ~ 40260251 (+) |
genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
species | eurasian perch (Perca fluviatilis) |
id | name | namespace |
---|---|---|
GO:0055085 | transmembrane transport | biological_process |
GO:0016021 | integral component of membrane | cellular_component |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU136980 | lncRNA | upstream | 70526 | 40135207 ~ 40135500 (+) | True | G101688 |
TU136979 | lncRNA | upstream | 72672 | 40129801 ~ 40133354 (+) | True | G101687 |
XR_005640213.1 | lncRNA | upstream | 160520 | 40044182 ~ 40045506 (+) | True | LOC120565265 |
TU136956 | lncRNA | upstream | 187333 | 39984470 ~ 40018693 (+) | True | G101666 |
TU137096 | lncRNA | downstream | 112 | 40260363 ~ 40260609 (+) | True | G101796 |
TU137125 | lncRNA | downstream | 226540 | 40486791 ~ 40487021 (+) | True | G101823 |
TU137133 | lncRNA | downstream | 247249 | 40507500 ~ 40507759 (+) | True | G101831 |
TU137134 | lncRNA | downstream | 248640 | 40508891 ~ 40509367 (+) | True | G101832 |
TU137338 | lncRNA | downstream | 599786 | 40860037 ~ 40940317 (+) | True | G101990 |
XM_039810363.1 | mRNA | upstream | 8788 | 40139434 ~ 40197238 (+) | True | herc2 |
XM_039810362.1 | mRNA | upstream | 9460 | 40139433 ~ 40196566 (+) | False | herc2 |
XM_039810366.1 | mRNA | upstream | 9460 | 40139433 ~ 40196566 (+) | False | herc2 |
XM_039810364.1 | mRNA | upstream | 9460 | 40140683 ~ 40196566 (+) | False | herc2 |
XM_039810407.1 | mRNA | upstream | 80080 | 40072042 ~ 40125946 (+) | True | cyfip1 |
XM_039810085.1 | mRNA | downstream | 157742 | 40417993 ~ 40480166 (+) | False | gabrb3 |
XM_039810084.1 | mRNA | downstream | 158085 | 40418336 ~ 40486609 (+) | False | gabrb3 |
XM_039810082.1 | mRNA | downstream | 158085 | 40418336 ~ 40480166 (+) | False | gabrb3 |
XM_039810086.1 | mRNA | downstream | 177600 | 40437851 ~ 40480166 (+) | True | gabrb3 |
XM_039810083.1 | mRNA | downstream | 177602 | 40437853 ~ 40478229 (+) | False | gabrb3 |
TU136718 | other | upstream | 640071 | 39561122 ~ 39565955 (+) | False | reps2 |
TU136690 | other | upstream | 741576 | 39460446 ~ 39464450 (+) | False | LOC120565708 |
TU136417 | other | upstream | 1325421 | 38877211 ~ 38880605 (+) | False | usp46 |
TU135875 | other | upstream | 2715954 | 37463914 ~ 37490072 (+) | True | G100843 |
XR_005640357.1 | other | upstream | 3073721 | 37132169 ~ 37132305 (+) | True | LOC120566223 |
XR_005640166.1 | other | downstream | 254842 | 40515093 ~ 40552957 (+) | False | atp10a |
unassigned_transcript_390 | other | downstream | 964840 | 41225091 ~ 41225162 (+) | True | trnap-cgg_3 |
unassigned_transcript_391 | other | downstream | 965383 | 41225634 ~ 41225705 (+) | True | trnap-ugg_3 |
TU137538 | other | downstream | 1192423 | 41452674 ~ 41453306 (+) | True | G102165 |