RNA id: TU137798



Basic Information


Item Value
RNA id TU137798
length 215
lncRNA type inter_gene
GC content 0.57
exon number 1
gene id G102343
representative True

Chromosome Information


Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 500468 ~ 500682 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


tgctcctagattgcattacgcacgctccgcacgccgcacgctctatttcagcgcttgtttgttgcaaaccgccatggaagcatgagcacctactggaggacctactggaggacctcccgttatcgtagacgaccaggctcgacataagcaatggcccgatggcccggggccagtaaaaacgtatgtcgggctggttgcagccacagtcactggtg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU137796 lncRNA downstream 11821 488298 ~ 488647 (-) True G102341
TU137794 lncRNA downstream 32018 466415 ~ 468450 (-) False tmsb2
TU137748 lncRNA downstream 112223 383449 ~ 388245 (-) True G102309
XR_005640572.1 lncRNA downstream 269012 230377 ~ 231456 (-) True LOC120567446
XR_005640573.1 lncRNA downstream 271029 227228 ~ 229439 (-) True LOC120567447
TU137800 lncRNA upstream 58049 558731 ~ 559029 (-) True G102345
TU137801 lncRNA upstream 59179 559861 ~ 560236 (-) True G102346
TU137804 lncRNA upstream 74310 574992 ~ 575259 (-) True G102349
TU137808 lncRNA upstream 79334 580016 ~ 580252 (-) True G102353
TU137821 lncRNA upstream 90850 591532 ~ 596908 (-) True G102359
XM_039812667.1 mRNA downstream 32042 466290 ~ 468426 (-) True tmsb2
XM_039813915.1 mRNA downstream 37441 460923 ~ 463027 (-) True LOC120567100
XM_039813891.1 mRNA downstream 39897 458620 ~ 460571 (-) True LOC120567087
XM_039812560.1 mRNA downstream 44249 452088 ~ 456219 (-) False lcp2b
XM_039813825.1 mRNA upstream 252840 753522 ~ 778323 (-) True lonrf1
XM_039814478.1 mRNA upstream 278955 779637 ~ 781792 (-) False med7
XM_039814479.1 mRNA upstream 278955 779637 ~ 781631 (-) True med7
XM_039814413.1 mRNA upstream 338264 838946 ~ 841618 (-) True insb
XM_039813220.1 mRNA upstream 1028729 1529411 ~ 1540492 (-) True LOC120566654
TU137703 other downstream 269024 220592 ~ 231444 (-) True G102276
TU137926 other upstream 338279 838961 ~ 841546 (-) False insb
XR_005640447.1 other upstream 1680361 2181043 ~ 2197917 (-) True sh2d1aa
XR_005640435.1 other upstream 2391737 2892419 ~ 2898545 (-) False pabir2
XR_005640589.1 other upstream 2395489 2896171 ~ 2896313 (-) True LOC120567496
TU138946 other upstream 3402309 3902991 ~ 3925309 (-) True G103268

Expression Profile