RNA id: TU137941



Basic Information


Item Value
RNA id TU137941
length 314
lncRNA type inter_gene
GC content 0.33
exon number 1
gene id G102463
representative True

Chromosome Information


Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 905928 ~ 906241 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


cacacattcaaaacagaatagatttcagtctggtgcctatcaaacactgctgattgcaattttagctgaaagcctaagcaggtgtcttgttttagactagttagtgaacatatatggtatttatacagagaaagatcagaaagtctttttttgtatacaaacaccaaataagaatgaaacaattctacactgtactgtttgagagaaacgggtaaaagagcaaagataccaatatgtccaggtaagatgtctgaggttatgtacacagctataaaaaaaagtgaaaaacactatatctttacaatagtaaaact

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU137911 lncRNA downstream 8266 812013 ~ 897662 (-) True G102438
XR_005640371.1 lncRNA downstream 21438 878894 ~ 884490 (-) False LOC120566308
XR_005640370.1 lncRNA downstream 24428 878894 ~ 881500 (-) True LOC120566308
TU137889 lncRNA downstream 74536 760303 ~ 831392 (-) True G102418
TU137829 lncRNA downstream 271771 633878 ~ 634157 (-) True G102367
TU137945 lncRNA upstream 58009 964250 ~ 969059 (-) True G102467
TU137966 lncRNA upstream 295832 1202073 ~ 1202556 (-) True G102485
TU137968 lncRNA upstream 301085 1207326 ~ 1207728 (-) True G102487
TU138078 lncRNA upstream 358551 1264792 ~ 1265202 (-) True G102573
TU138113 lncRNA upstream 646272 1552513 ~ 1552989 (-) True G102606
XM_039814413.1 mRNA downstream 64310 838946 ~ 841618 (-) True insb
XM_039814478.1 mRNA downstream 124136 779637 ~ 781792 (-) False med7
XM_039814479.1 mRNA downstream 124297 779637 ~ 781631 (-) True med7
XM_039813825.1 mRNA downstream 127605 753522 ~ 778323 (-) True lonrf1
XM_039812667.1 mRNA downstream 437502 466290 ~ 468426 (-) True tmsb2
XM_039813220.1 mRNA upstream 623170 1529411 ~ 1540492 (-) True LOC120566654
XM_039813222.1 mRNA upstream 640142 1546383 ~ 1550627 (-) True eif4ebp3l
XM_039813225.1 mRNA upstream 668151 1574392 ~ 1576708 (-) True nxt2
XM_039813361.1 mRNA upstream 843532 1749773 ~ 1767405 (-) True LOC120566744
XM_039813362.1 mRNA upstream 844560 1750801 ~ 1767408 (-) False LOC120566744
TU137926 other downstream 64382 838961 ~ 841546 (-) False insb
TU137703 other downstream 674484 220592 ~ 231444 (-) True G102276
XR_005640447.1 other upstream 1274802 2181043 ~ 2197917 (-) True sh2d1aa
XR_005640435.1 other upstream 1986178 2892419 ~ 2898545 (-) False pabir2
XR_005640589.1 other upstream 1989930 2896171 ~ 2896313 (-) True LOC120567496
TU138946 other upstream 2996750 3902991 ~ 3925309 (-) True G103268
TU138957 other upstream 3022813 3929054 ~ 3933202 (-) False smim19

Expression Profile