RNA id: TU138282



Basic Information


Item Value
RNA id TU138282
length 356
lncRNA type inter_gene
GC content 0.50
exon number 2
gene id G102749
representative True

Chromosome Information


Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 2299673 ~ 2300414 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


TACAGTCAATCTGGTAACATTACGGAGAGAATTAGCGAACAAATTGTGGGCTCGTCAGATTAGTATGCCACCAAAGCAACAGCCTGGGGATTCAGAAACACAATTTCCACACAGGAAGCACATACCATAACTTTACAACAGCGAGCcacacagtaaacaaaccggACAGGAGCCAATGGGAGCCCATGATCACCGCTGTGACATTCGGAAAGGGCTGAAAACTGAGCCCCGTGGTCCCGCCCACCGTTGACTTTGTTCAGTGggctgctggaggaggaggaggtcacAGACATGGAAGCAGCTGAAACTTTGGATGGGAAATGGTCTGTGTCCTCATCACCTGAACATGTCCGAGT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU138281 lncRNA downstream 452 2298788 ~ 2299221 (-) True G102748
TU138273 lncRNA downstream 78227 2219576 ~ 2221446 (-) True G102741
XR_005640531.1 lncRNA downstream 362486 1936573 ~ 1937187 (-) True LOC120567184
TU138151 lncRNA downstream 637474 1634594 ~ 1662199 (-) True G102638
TU138132 lncRNA downstream 698138 1593835 ~ 1601535 (-) True G102621
TU138287 lncRNA upstream 8052 2308466 ~ 2310822 (-) True G102754
XR_005640479.1 lncRNA upstream 40783 2341197 ~ 2341905 (-) True LOC120566871
TU138310 lncRNA upstream 83504 2383918 ~ 2384235 (-) True G102774
TU138312 lncRNA upstream 83893 2384307 ~ 2384671 (-) True G102776
TU138325 lncRNA upstream 130621 2431035 ~ 2431275 (-) True G102788
XM_039813306.1 mRNA downstream 1551 2221502 ~ 2298122 (-) False si:ch211-26b3.4
XM_039813305.1 mRNA downstream 2039 2221502 ~ 2297634 (-) True si:ch211-26b3.4
XM_039813308.1 mRNA downstream 2256 2221502 ~ 2297417 (-) False si:ch211-26b3.4
XM_039813309.1 mRNA downstream 2256 2221502 ~ 2297417 (-) False si:ch211-26b3.4
XM_039813307.1 mRNA downstream 2256 2221502 ~ 2297417 (-) False si:ch211-26b3.4
XM_039812666.1 mRNA upstream 53145 2353559 ~ 2355799 (-) True LOC120566307
XM_039814486.1 mRNA upstream 99858 2400272 ~ 2405790 (-) True LOC120567491
XM_039814485.1 mRNA upstream 105706 2406120 ~ 2419903 (-) False LOC120567490
XM_039814484.1 mRNA upstream 105706 2406120 ~ 2419902 (-) True LOC120567490
XM_039812676.1 mRNA upstream 137187 2437601 ~ 2439326 (-) True si:dkey-237j10.2
XR_005640447.1 other downstream 101756 2181043 ~ 2197917 (-) True sh2d1aa
TU137926 other downstream 1458127 838961 ~ 841546 (-) False insb
TU137703 other downstream 2068229 220592 ~ 231444 (-) True G102276
XR_005640435.1 other upstream 592005 2892419 ~ 2898545 (-) False pabir2
XR_005640589.1 other upstream 595757 2896171 ~ 2896313 (-) True LOC120567496
TU138946 other upstream 1602577 3902991 ~ 3925309 (-) True G103268
TU138957 other upstream 1628640 3929054 ~ 3933202 (-) False smim19
TU139113 other upstream 2020295 4320709 ~ 4399990 (-) False LOC120567378

Expression Profile