RNA id: TU141769


Basic Information

Item Value
RNA id TU141769
length 514
lncRNA type inter_gene
GC content 0.34
exon number 1
gene id G105577
representative True

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 17117751 ~ 17118264 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

tatatatatatatatatatatatacacatacatacatacatacatacatacatacatacatacatacataacaaaCCCTAGATAATAAACAATTGCAGAACATTGTGAGTTGGTAAAGGTAAAAATAGTTTTGAGTGTTATCTCTAGCAAATGAGCACGATCCATTACTGCATCAAAACTGAAATGTCATTGAAAGTGGTGGGTGAAaccatattttgttttgttctatGGCTAagtgatttggttttgtgttttgtttgtgctcACTAACAAGTTTCCCAGACCCTCGTCCTCCAGTCCTAAATAATCCCAATAACCCAATCCCAAACGTGGGATTATTCCCGTGAAGTCAGTGGTCATCATATTGGCATTAGTCTTTAAAGTATGCACATATGCTGTCTCCATGAAATTAATTGTGGTATATATTAAAAATCCCCGCATTTCGTGTACCTTTAGTCTATATTTTCTTTCAGTCTGATTGTGGATAAACTACTGGTGGGGAAGAaccaaaata

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU141733 lncRNA downstream 62129 17052505 ~ 17055622 (-) True G105549
TU141562 lncRNA downstream 362193 16755336 ~ 16755558 (-) True G105443
TU141554 lncRNA downstream 428446 16689083 ~ 16689305 (-) True G105436
TU141553 lncRNA downstream 429161 16688056 ~ 16688590 (-) True G105435
TU141551 lncRNA downstream 430022 16687479 ~ 16687729 (-) True G105433
TU141755 lncRNA upstream 23882 17142146 ~ 17151568 (-) False tmsb1
TU141757 lncRNA upstream 23882 17142146 ~ 17151568 (-) False tmsb1
TU141770 lncRNA upstream 33907 17152171 ~ 17153593 (-) True G105578
TU141778 lncRNA upstream 48724 17166988 ~ 17167758 (-) False frmpd3
TU141793 lncRNA upstream 206196 17324460 ~ 17324955 (-) True G105598
XM_039813409.1 mRNA downstream 4170 17098532 ~ 17113581 (-) True kctd12b
XM_039812990.1 mRNA downstream 93024 17008128 ~ 17024727 (-) False ogt.1
XM_039813169.1 mRNA upstream 201 17118465 ~ 17125904 (-) True znf711
XM_039813171.1 mRNA upstream 201 17118465 ~ 17125903 (-) False znf711
XM_039813170.1 mRNA upstream 201 17118465 ~ 17125903 (-) False znf711
XM_039813172.1 mRNA upstream 201 17118465 ~ 17125902 (-) False znf711
XM_039813174.1 mRNA upstream 8081 17126345 ~ 17138211 (-) False zgc:66447
TU141625 other downstream 154277 16957662 ~ 16963474 (-) False rab9b
XR_005640433.1 other downstream 442896 16592908 ~ 16674855 (-) False gria3b
TU141311 other downstream 1249896 15866067 ~ 15867855 (-) False hnrnph1
XR_005640446.1 other downstream 1498643 15604604 ~ 15619108 (-) False tspan17
TU141106 other downstream 1983015 15133530 ~ 15134736 (-) True G105086
TU141756 other upstream 23882 17142146 ~ 17151568 (-) False tmsb1
XR_005640507.1 other upstream 403877 17522141 ~ 17577811 (-) False nexmifb
TU142030 other upstream 665296 17783560 ~ 17795223 (-) False LOC120567448
TU142092 other upstream 868994 17987258 ~ 17991871 (-) False sfxn1
TU142254 other upstream 1185005 18303269 ~ 18305695 (-) False reep2

Expression Profile