RNA id: TU143133


Basic Information

Item Value
RNA id TU143133
length 585
lncRNA type inter_gene
GC content 0.41
exon number 2
gene id LOC120567131
representative True

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 20559937 ~ 20561344 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

cttgggtccgtgagctgaccaatcagatttaCGTCTCCTCACATCCCTTTTAGCGTCTGCATCAGAATGTAGGAGGCTGCCATTATTCACTCAGTAAGATAAAAAAGAACGCCAAttagtgaaataaatcaattctacATACTAAATACTATCTAATACTGCCTATACCTTGTTGTAAACAGAGCAAAAGAGAGCTGTGCCTGAATCAGCTATCGTCACGGAGTTATAGGATGTAAAATGgtggaggaggtgaaaagGCTACGCAGGGGAGGCCCAGTCCACAGAGGGATATTGAATCACATCGATTCTTCACATCCCAGAGACTTCCAGGgtttagagattcccagttcaggaTCGAGACTCTGAACGTAGACGGATTTCCCTTGATTCATTCTTCATGGTGGAAGGACAAacggaaaccaaactcatatgggccccaatgttgaacatctctgaactcttgtcatcaaagaacaattgagctcatagaactgaaaagggtttcttttgtgtgcacactttattttttcagttagtttatctgtatgtatgccatatttctgtgtatattaataccactttact

Function

GO: NA

KEGG:

id description
ko04113 Meiosis - yeast

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU143115 lncRNA downstream 13968 20506969 ~ 20545969 (-) True G106556
TU143107 lncRNA downstream 64359 20488887 ~ 20495578 (-) True G106548
TU143094 lncRNA downstream 123134 20435969 ~ 20436803 (-) True G106535
TU143079 lncRNA downstream 160324 20399337 ~ 20399613 (-) True G106520
TU143071 lncRNA downstream 217275 20336365 ~ 20342662 (-) True G106512
TU143210 lncRNA upstream 380257 20941531 ~ 20943593 (-) True G106631
TU143211 lncRNA upstream 384764 20946038 ~ 20947573 (-) True G106632
XR_005640582.1 lncRNA upstream 394063 20955337 ~ 20960892 (-) True LOC120567470
TU143225 lncRNA upstream 438685 20999959 ~ 21000211 (-) True G106645
TU143333 lncRNA upstream 508867 21070141 ~ 21073913 (-) False LOC120566356
XM_039814417.1 mRNA downstream 578304 19971833 ~ 19981633 (-) True fgf18a
XM_039814418.1 mRNA downstream 578309 19971833 ~ 19981628 (-) False fgf18a
XM_039812992.1 mRNA downstream 808230 19741886 ~ 19751707 (-) True LOC120566486
XM_039813054.1 mRNA downstream 832646 19723502 ~ 19727291 (-) True LOC120566528
XM_039812995.1 mRNA downstream 861171 19598361 ~ 19698766 (-) False spock1
XM_039813132.1 mRNA upstream 24708 20585982 ~ 20699203 (-) False LOC120566601
XM_039813131.1 mRNA upstream 24708 20585982 ~ 20699203 (-) True LOC120566601
XM_039812634.1 mRNA upstream 140268 20701542 ~ 20703679 (-) True LOC120566290
XM_039812559.1 mRNA upstream 154553 20715827 ~ 20770031 (-) True trpc7b
XM_039814436.1 mRNA upstream 253204 20814478 ~ 20834647 (-) True dock2
TU142968 other downstream 326013 20230908 ~ 20233924 (-) True G106443
TU142874 other downstream 578804 19972415 ~ 19981133 (-) False fgf18a
TU142773 other downstream 1077379 19480018 ~ 19482558 (-) False tlr1
TU142573 other downstream 1340793 19215989 ~ 19219144 (-) False LOC120566717
TU142417 other downstream 1868527 18687788 ~ 18691410 (-) True LOC120566257
TU143328 other upstream 566564 21127838 ~ 21130970 (-) True G106728
TU143775 other upstream 1228979 21790253 ~ 21790725 (-) True G106988
TU143804 other upstream 1558411 22119685 ~ 22120067 (-) True G107015
TU143931 other upstream 2129886 22691160 ~ 22692831 (-) True G107117
TU144086 other upstream 2429713 22990987 ~ 22993229 (-) True G107235

Expression Profile