Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU144586 |
| length | 203 |
| lncRNA type | intronic |
| GC content | 0.51 |
| exon number | 2 |
| gene id | G107610 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053121.1 |
| NCBI id | CM020918.1 |
| chromosome length | 40300294 |
| location | 23792054 ~ 23792502 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | description |
|---|---|
| ko04744 | Phototransduction |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU144202 | lncRNA | downstream | 528155 | 23242037 ~ 23263899 (-) | False | G107324 |
| TU144201 | lncRNA | downstream | 548114 | 23242037 ~ 23243940 (-) | True | G107324 |
| TU144152 | lncRNA | downstream | 567598 | 23170148 ~ 23224456 (-) | True | G107282 |
| TU144160 | lncRNA | downstream | 610337 | 23179692 ~ 23181717 (-) | True | G107290 |
| TU144149 | lncRNA | downstream | 618636 | 23092565 ~ 23173418 (-) | False | trpt1 |
| TU144596 | lncRNA | upstream | 92095 | 23884597 ~ 23988901 (-) | False | rab41 |
| TU144597 | lncRNA | upstream | 92095 | 23884597 ~ 23971180 (-) | False | rab41 |
| TU144595 | lncRNA | upstream | 97403 | 23889905 ~ 23892263 (-) | False | rab41 |
| TU144657 | lncRNA | upstream | 406997 | 24199499 ~ 24259346 (-) | True | G107667 |
| TU144740 | lncRNA | upstream | 495647 | 24288149 ~ 24381265 (-) | False | LOC120566461 |
| XM_039812857.1 | mRNA | downstream | 3236 | 23770291 ~ 23788818 (-) | False | dlg3 |
| XM_039813298.1 | mRNA | downstream | 34903 | 23710021 ~ 23757151 (-) | True | kdrl |
| XM_039813296.1 | mRNA | downstream | 94564 | 23694270 ~ 23697490 (-) | True | cdx4 |
| XM_039814054.1 | mRNA | downstream | 99245 | 23686594 ~ 23692809 (-) | True | chic1 |
| XM_039813646.1 | mRNA | downstream | 140332 | 23646135 ~ 23651722 (-) | True | slc25a43 |
| XM_039812860.1 | mRNA | upstream | 65520 | 23858022 ~ 23868756 (-) | False | gdpd2 |
| XM_039812859.1 | mRNA | upstream | 65520 | 23858022 ~ 23868756 (-) | True | gdpd2 |
| XM_039813779.1 | mRNA | upstream | 86559 | 23879061 ~ 23883457 (-) | True | stard14 |
| XM_039813212.1 | mRNA | upstream | 92086 | 23884588 ~ 23892299 (-) | True | rab41 |
| XM_039813211.1 | mRNA | upstream | 92086 | 23884588 ~ 23892298 (-) | False | rab41 |
| unassigned_transcript_474 | other | downstream | 418046 | 23373936 ~ 23374008 (-) | True | trnaf-gaa_66 |
| TU144162 | other | downstream | 605043 | 23184272 ~ 23187011 (-) | False | rnaseh2c |
| TU144153 | other | downstream | 615054 | 23175691 ~ 23177000 (-) | False | trpt1 |
| unassigned_transcript_473 | other | downstream | 626626 | 23165357 ~ 23165428 (-) | True | trnaw-cca_12 |
| unassigned_transcript_472 | other | downstream | 630595 | 23161388 ~ 23161459 (-) | True | trnaw-cca_11 |
| XR_005640439.1 | other | upstream | 94322 | 23886824 ~ 23892301 (-) | False | rab41 |
| TU144931 | other | upstream | 780939 | 24573441 ~ 24579099 (-) | True | G107864 |
| unassigned_transcript_475 | other | upstream | 1069610 | 24862112 ~ 24862184 (-) | False | trnav-uac_15 |
| TU145115 | other | upstream | 1487101 | 25279603 ~ 25282199 (-) | False | G107989 |
| TU145117 | other | upstream | 1487101 | 25279603 ~ 25288086 (-) | True | G107989 |
