RNA id: TU144865


Basic Information

Item Value
RNA id TU144865
length 378
lncRNA type inter_gene
GC content 0.44
exon number 1
gene id G107819
representative True

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 24945327 ~ 24945704 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ataacatacagTGATAGACACAATGGAATAGTTGAGTGTCACCCCCAGAAATAGCCTGAATTCTAAAATGATTTAATTGAAAGACAACACAGAAATGTGAACTAGTACTACCACTAGAGGGCGTACGTCAACACTTTCATCCCTGTGGTGAAGTACAATTAAGACAGAGCTAATACTGTAACTTCACAAAGCAGTATGGGATGCGTATGAAAACACGTTACTTGTCGGTTGTCTCCCTGGTGAACAGTGCAGCGGTCAGACACCCCGTTGGCCACAAGGTTTTTCTGTAACGTTTCAACTGCATCAGGGTTCCACTCACAGGCGTGAAGATGACTGGCCCCCGCATGGACCAGATATGGGAGAGTGAAGTATCCAATA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU144864 lncRNA upstream 787 24943550 ~ 24944540 (+) True G107818
TU144847 lncRNA upstream 7562 24907352 ~ 24937765 (+) False G107803
TU144860 lncRNA upstream 11632 24929739 ~ 24933695 (+) True G107814
TU144845 lncRNA upstream 33909 24908906 ~ 24911418 (+) True G107803
TU144841 lncRNA upstream 85605 24857848 ~ 24859722 (+) True G107801
TU144866 lncRNA downstream 1034 24946738 ~ 24946942 (+) True G107820
TU144867 lncRNA downstream 1417 24947121 ~ 24947336 (+) True G107821
XR_005640455.1 lncRNA downstream 160736 25106440 ~ 25107622 (+) True LOC120566737
TU145067 lncRNA downstream 306421 25252125 ~ 25252468 (+) True G107958
TU145085 lncRNA downstream 325835 25271539 ~ 25273631 (+) True G107972
XM_039813949.1 mRNA upstream 17359 24920307 ~ 24927968 (+) False srpx2
XM_039813948.1 mRNA upstream 17359 24920313 ~ 24927968 (+) True srpx2
XM_039813951.1 mRNA upstream 17359 24921217 ~ 24927968 (+) False srpx2
XM_039813745.1 mRNA upstream 52084 24870784 ~ 24893243 (+) False bcorl1
XM_039813958.1 mRNA downstream 2304 24948008 ~ 24977281 (+) False zdhhc9
XM_039813957.1 mRNA downstream 6757 24952461 ~ 24977281 (+) False zdhhc9
XM_039813959.1 mRNA downstream 7430 24953134 ~ 24980800 (+) True zdhhc9
XM_039813356.1 mRNA downstream 127939 25073643 ~ 25097023 (+) False apln
XM_039814042.1 mRNA downstream 235284 25180988 ~ 25186479 (+) True clic2
TU144828 other upstream 102086 24841839 ~ 24843241 (+) False nox1
TU144826 other upstream 136626 24805200 ~ 24808701 (+) True G107789
TU144527 other upstream 1080053 23855525 ~ 23865274 (+) True LOC120566416
TU144403 other upstream 1319038 23590328 ~ 23626289 (+) True G107487
TU144281 other upstream 1450338 23492844 ~ 23494989 (+) True G107386
TU144869 other downstream 127509 25073213 ~ 25097002 (+) False apln
TU144871 other downstream 127509 25073213 ~ 25097002 (+) False apln
TU144872 other downstream 127509 25073213 ~ 25097002 (+) True apln
TU144873 other downstream 127509 25073213 ~ 25097002 (+) False apln
TU144875 other downstream 127509 25073213 ~ 25097002 (+) False apln

Expression Profile