RNA id: TU145245



Basic Information


Item Value
RNA id TU145245
length 741
RNA type TUCP
GC content 0.47
exon number 7
gene id btk
representative False

Chromosome Information


Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 26461288 ~ 26476570 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


CAAGCAACTGAGGCATGTCACCGCTTTAAGCCTCAGCATCTGCAGTTGTCTGTCtgatgtttgacttttttggTTGTCTGGATTAATGTTGACTGAATCATGTCAGACAATATACTGGAAGAAATCTTCATTAAACGATctcagcagaagaagaagacctcCCCTTTGAACTACAAGGAGAGATGAAGCGAAAAGGTTTAAAAGGATCAGTTGACATCGAGAAGATCAGGTGTGTAGAGACAGTCCAGCCAGAGACCAACTCCCCGCAAGAGCGCATGTATGCTTTCCAGATCATTTATGATGAGGGGCCGCTGTACATCTTTGCAAAGACTGAGGATATACGGGCTCAATGGATAAAGAAGCTGAAAGAAATGGTGCGCTTCAACAAGGATCTCATGCAAAAGTACCATCCTTGTTTCTGGGTGGATGGGGTTTGGCTGTGCTGCCAGCAGGAAGTTAAACAAGCAATGGGTTGCAAGGTGCTAGATAATAAGAACGGCTTTACATCTAAACCATCTCGGCGAAGGGGATCCAGGAAACCTCTTCCTCCTACACCAACAGAGGAGAAGTTGGTTCGGCCTTTACCTCCACAGCCTCCTGAGCCACCTTCCCCCTCTGTAGGCATGACTGTCATAGCAGAGTATAACTACACACCAATGTCACCCCAAGACCTGGAGCTCAGGAAGGATGAAGAGTACACCATCCTGGAGATGTCTGATCAGAATTGGTGGAAAGCCAGAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU145219 lncRNA upstream 694 26459040 ~ 26460626 (+) True G108066
TU145220 lncRNA upstream 694 26459040 ~ 26460626 (+) False G108066
TU145215 lncRNA upstream 187532 26273588 ~ 26273788 (+) True G108062
TU145184 lncRNA upstream 621965 25837363 ~ 25839355 (+) True G108043
TU145180 lncRNA upstream 686532 25774521 ~ 25774788 (+) True G108039
TU145247 lncRNA downstream 9008 26476822 ~ 26479297 (+) True timm8a
TU145253 lncRNA downstream 24558 26492372 ~ 26492997 (+) True G108094
TU145339 lncRNA downstream 472113 26939927 ~ 26940175 (+) True G108163
TU145340 lncRNA downstream 495466 26963280 ~ 26963585 (+) True G108164
TU145341 lncRNA downstream 500805 26968619 ~ 26968868 (+) True G108165
XM_039813373.1 mRNA upstream 3408 26451784 ~ 26457912 (+) True gla
XM_039814480.1 mRNA upstream 42356 26357802 ~ 26418964 (+) True glra4a
XM_039814481.1 mRNA upstream 42356 26357802 ~ 26418964 (+) False glra4a
XM_039813523.1 mRNA upstream 813119 25594313 ~ 25648201 (+) True pcdh19
XM_039813524.1 mRNA upstream 813119 25594313 ~ 25648201 (+) False pcdh19
XM_039813378.1 mRNA downstream 8982 26476796 ~ 26478860 (+) False timm8a
XM_039813372.1 mRNA downstream 15881 26483695 ~ 26486831 (+) True mars2
XM_039813405.1 mRNA downstream 376873 26844687 ~ 27069215 (+) True LOC120566768
XM_039813407.1 mRNA downstream 376873 26844687 ~ 27069215 (+) False LOC120566768
XM_039813406.1 mRNA downstream 381208 26849022 ~ 27069215 (+) False LOC120566768
unassigned_transcript_476 other upstream 1140024 25321225 ~ 25321296 (+) True trnae-uuc_61
XR_005640445.1 other upstream 1153394 25291607 ~ 25307926 (+) False sept6
XR_005640591.1 other upstream 1180240 25280948 ~ 25281080 (+) True LOC120567498
TU144872 other upstream 1364318 25073213 ~ 25097002 (+) True apln
TU145248 other downstream 9008 26476822 ~ 26479149 (+) False timm8a
XR_005640585.1 other downstream 672522 27140336 ~ 27140454 (+) True LOC120567492
TU145443 other downstream 922596 27390410 ~ 27393621 (+) True grxcr1a
XR_005640495.1 other downstream 3760159 30227973 ~ 30279852 (+) False gria2b
XR_005640496.1 other downstream 3760160 30227974 ~ 30280635 (+) False gria2b

Expression Profile