RNA id: XM_039812548.1


Basic Information

Item Value
RNA id XM_039812548.1
length 1424
RNA type mRNA
GC content 0.52
exon number 9
gene id aldob
representative True

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 19331706 ~ 19334698 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ACCTGGGTGACACACGCCCCGCCACATCACGAGCACCTCCTCCACAGCAACAAACAGCCTTTAAATACAGCTTCGTGCCCAGTTTTCGACCTCTCTGTACAGGCCGTTTGCTACTTCTGTTGCCGTTGTTATTTGAAAAAACTCTGAAAGATGACTCATCAGTTCCCATCCCTCTCTCCGGAGCAGAAGAAGGAGCTCTCTGACATTGCTCAGAGGATCGTGGCTCCAGGAAAGGGAATCCTGGCTGCAGATGAATCAACGGGAACCATGGGAAAGCGTCTCCAGAAAATCAATGTTGAAAACAACGAGGAGAACCGTCGCTACTTCCGCGACCTCCTCTTCTCCGCTGACCCCTTAATCTCCAACTGTGTGGGTGGGGTCATCTTCTTCCATGAGACTCTCTACCAGAAATCAAACAGCGGCAAGCTCTTCCCCCAAGTCATCAAGGATCAGGGCATTGTCGTCGGCATCAAGGTGGACAAAGGCACAGCTGGTCTAAACGGAACCGATGGAGAGACCACCACACAAGGTCTCGATGGCCTCTCAGAGCGCTGTGCCCAGTATAAGAAGGACGGTTGTGACTTTGCCAAGTGGAGGTGTGTGCTCAAGATCTCAGATAGCTGCCCATCAGCTCTCGCCATTGCAGAGAATGCCAATGTCCTTGCCAGATATGCCAGTATCTgccaacagAATGGCCTGGTGCCTATTGTGGAGCCAGAGATCCTGCCTGACGGAGACCATGACCTGCTGCGCTGCCAGTACGTCACAGAAAAGGTTCTGGCTGCTGTGTACAAGGCTCTGTCCGATCACCACGTGTACCTGGAGGGCACTCTGCTGAAGCCCAACATGGTCACTGCTGGACACTCCTGCACTAAGAAGTTCACCCCTCAGGAGGTTGGCATGGCCACCGTGACCGCTCTGAGGCGCACCGTCCCCTCTTCTGTGCCTGGCATTTGTTTCCTGTCTGGAGGCCAGAGTGAGGAGGAGGCATCCCGCAACCTGAACGCCATTAACCAGGTGCCTCTCCATCGCCCCTGGAAGCTGACCTTCTCTTACGGCCGTGCACTCCAGGCCTCTGCTCTTGCAGCCTGGCAGGGCAAAGCTGCCAACAAGGCAGCTGCACAAGAAGCATTCAAAACCAGGGCCAAGATCAATGGCCTGGCTGCCAAAGGAGAGTACAAGCCCTCCGGCTCAGCTGACCAGGCCTCCATGCAGTCTCTGTACACAGCCAGCTACGTCTATTAAATACTGTGAAcgttaaaaataaaaccaaatgcAAATGGACAAAATATGACCTGAAATGGCTCTGCTGGATTTCCCTTTTCCCTAAGACTACCAACACCAGGAGAAGACGTCCATTATAATGTTGAACTACTGTTTGTCTACTCAGTTAAAATAACTGGAAATAAATTAAGTGACCAAAA

Function

GO:

id name namespace
GO:0006096 glycolytic process biological_process
GO:0004332 fructose-bisphosphate aldolase activity molecular_function

KEGG:

id description
K01623 ALDO; fructose-bisphosphate aldolase, class I

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU142699 lncRNA downstream 10400 19320263 ~ 19321306 (-) True G106248
TU142694 lncRNA downstream 17290 19312809 ~ 19314416 (-) True G106243
XR_005640451.1 lncRNA downstream 43237 19287076 ~ 19288469 (-) True LOC120566721
XR_005640450.1 lncRNA downstream 66230 19262913 ~ 19265476 (-) True LOC120566720
XR_005640452.1 lncRNA downstream 68834 19262030 ~ 19262872 (-) True LOC120566722
TU142713 lncRNA upstream 5796 19340494 ~ 19400495 (-) False G106259
TU142731 lncRNA upstream 60112 19394810 ~ 19395994 (-) True G106276
TU142712 lncRNA upstream 64950 19399648 ~ 19450124 (-) True G106259
TU142749 lncRNA upstream 101142 19435840 ~ 19436917 (-) False tomm5
TU142770 lncRNA upstream 142470 19477168 ~ 19497081 (-) False G106303
XM_039812734.1 mRNA downstream 26641 19301805 ~ 19305065 (-) True arsia
XM_039813322.1 mRNA downstream 49032 19277131 ~ 19282674 (-) True LOC120566716
XM_039813323.1 mRNA downstream 49032 19279936 ~ 19282674 (-) False LOC120566716
XM_039813324.1 mRNA downstream 49033 19277131 ~ 19282673 (-) False LOC120566716
XM_039813327.1 mRNA downstream 104046 19219074 ~ 19227660 (-) False LOC120566717
XM_039814361.1 mRNA upstream 31122 19365820 ~ 19373983 (-) False LOC120567398
XM_039814360.1 mRNA upstream 31122 19365820 ~ 19373983 (-) True LOC120567398
XM_039814359.1 mRNA upstream 41506 19376204 ~ 19384972 (-) False LOC120567397
XM_039814357.1 mRNA upstream 41506 19376204 ~ 19384972 (-) True LOC120567397
XM_039814358.1 mRNA upstream 46094 19380792 ~ 19384972 (-) False LOC120567397
TU142573 other downstream 112562 19215989 ~ 19219144 (-) False LOC120566717
TU142417 other downstream 640296 18687788 ~ 18691410 (-) True LOC120566257
TU142254 other downstream 1026011 18303269 ~ 18305695 (-) False reep2
TU142092 other downstream 1339835 17987258 ~ 17991871 (-) False sfxn1
TU142030 other downstream 1536483 17783560 ~ 17795223 (-) False LOC120567448
TU142773 other upstream 145320 19480018 ~ 19482558 (-) False tlr1
TU142874 other upstream 637717 19972415 ~ 19981133 (-) False fgf18a
TU142968 other upstream 896210 20230908 ~ 20233924 (-) True G106443
TU143328 other upstream 1793140 21127838 ~ 21130970 (-) True G106728
TU143775 other upstream 2455555 21790253 ~ 21790725 (-) True G106988

Expression Profile