RNA id: XM_039812663.1


Basic Information

Item Value
RNA id XM_039812663.1
length 1366
RNA type mRNA
GC content 0.46
exon number 8
gene id tmx2a
representative True

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 21302070 ~ 21308135 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ATGGGTCTAATCACAGGACTGTGTACTTTCTTGTATCACTTACCTCAGATTTACAAATGGTTGCTGAAACCGTATTATATCACCTCGTTCTTCATGACCGTCGCCTTCTTGGTGGCCCGAAAGGCTCCCGGTCTGTGCGAGCATCTGGCGACCCAGCGGGAGGACGGCAACTCCTGCGACTTTGACTGGagAGAGGTGGAGATTCTCATGTTTCTTAGTGCAATAGTGATGATGAAGAACAGGAGAGCGATCACACTGGAGCAGCACATAGGCAACGTGTTCCTGTTCAGTAAAGTGGCCAACGTCATGCTTTTCTTCAGGCTGGACATTCGGCTCGGCATTCTTTACCTCGCATTGTGTGTCGCATTCGTCATGACCTGTAAGCCACCTCTCTACATGGGCCCCGAGTACATCAAGTACTTCAGTGACAAGACCATGGATGAGGagctgcagagagacagtcGTGTCACCTGGATTGTTGAATTCTACGCCAACTGGTCCTCTGACTGCCAGTCTTTCGCTCCCATTTTTGCCGACCTCTCTCTCAAGTACAACTGTCCTGGACTCAGGTTTGGAAAGGTGGACGTTGGGCGCTATGGAGAGGTTTCAGAGAGGTACAGGGTTAGTACTTCTCCTCTGACCAAGCAGCTGCCCTCACTGGTGCTTTTCCAAGAAGGGCGGGAAGTTATGAGACGTCCAATGGTGGACAATAAAGGGAGAGCTGTGTCTTGGACCTTCAGTGAGGAGAACATTATCCGAGAGTTTAACCTCAACGAGCTCTTCCAAAAATCCAAGAAGCTGAACAAAAGCCACGGTTTGAATGAAGAGGAGCAGAACAGCACTCAGCCAGAGGAGGGCAGCAACGAGCTCCCTTCTGAAACCAACAACCCGGAGCAGCCCACGGAGAGCAAGAAAGATCAGTGAAGTGGATGATTCACAGAGGGCCTGCATGAACTCTTTCATTTTCTTCAGACATTGCCATGCCTTACATTATTGCAAATGTCCAGATTATGGGCCAGAGAGGAAAATAGGTTCAACCACTACTCAATGTCATGTCTACATTAAGTCTTTACTTTAGCAAATAAATACCCAAAACCACTGGACCACCTTTGCCTGGTGTGACTATGACGTAGTGTAGTTTGAATTCAGCTATGCAATAAAGAAGAAATTATTAGGCAACATTTTATTACCTAAGTTATTTGTGAACAAATGcctttttttgtaattgttttttggCTACTTTCAGCAACATCACTCTGTTAACTTTTGCTGCCTGTATTTTGCCATTAAGTGTGTTTACTGATGTTTGTTTCAAAACCAAAGTAAAAGATGAGgtgaaactgaaataaaaaaagataagcGTGCA

Function

GO:

id name namespace
GO:0045454 cell redox homeostasis biological_process

KEGG:

id description
K25112 TMX2; thioredoxin-related transmembrane protein 2

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU143431 lncRNA downstream 14289 21286314 ~ 21287781 (-) True G106793
TU143417 lncRNA downstream 45423 21252905 ~ 21256647 (-) True G106784
TU143360 lncRNA downstream 119370 21179985 ~ 21182700 (-) False LOC120566634
XR_005640437.1 lncRNA downstream 138007 21149902 ~ 21164063 (-) False LOC120566633
XR_005640436.1 lncRNA downstream 138007 21160341 ~ 21164063 (-) True LOC120566633
TU143444 lncRNA upstream 4228 21312363 ~ 21314127 (-) True G106802
TU143459 lncRNA upstream 52181 21360316 ~ 21408289 (-) True G106813
TU143475 lncRNA upstream 81477 21389612 ~ 21401183 (-) False G106825
TU143476 lncRNA upstream 86327 21394462 ~ 21401183 (-) True G106825
TU143506 lncRNA upstream 132689 21440824 ~ 21443089 (-) True G106848
XM_039812670.1 mRNA downstream 63547 21233306 ~ 21238523 (-) True smtnl1
XM_039814155.1 mRNA downstream 71695 21220217 ~ 21230375 (-) True LOC120567254
XM_039814154.1 mRNA downstream 72243 21220217 ~ 21229827 (-) False LOC120567254
XM_039813193.1 mRNA downstream 82640 21196765 ~ 21219430 (-) False LOC120566637
XM_039812660.1 mRNA upstream 6159 21314294 ~ 21348934 (-) False slc43a1a
XM_039812661.1 mRNA upstream 6159 21314294 ~ 21347428 (-) True slc43a1a
XM_039812659.1 mRNA upstream 6159 21314294 ~ 21340023 (-) False slc43a1a
XM_039812662.1 mRNA upstream 58953 21367088 ~ 21381178 (-) True clcf1
XM_039813290.1 mRNA upstream 108559 21416694 ~ 21423613 (-) False zgc:113229
TU143328 other downstream 171100 21127838 ~ 21130970 (-) True G106728
TU142968 other downstream 1068146 20230908 ~ 20233924 (-) True G106443
TU142874 other downstream 1320937 19972415 ~ 19981133 (-) False fgf18a
TU142773 other downstream 1819512 19480018 ~ 19482558 (-) False tlr1
TU142573 other downstream 2082926 19215989 ~ 19219144 (-) False LOC120566717
TU143775 other upstream 482118 21790253 ~ 21790725 (-) True G106988
TU143804 other upstream 811550 22119685 ~ 22120067 (-) True G107015
TU143931 other upstream 1383025 22691160 ~ 22692831 (-) True G107117
TU144086 other upstream 1682852 22990987 ~ 22993229 (-) True G107235
TU144154 other upstream 1821574 23129709 ~ 23134785 (-) True G107284

Expression Profile