RNA id: XM_039812890.1


Basic Information

Item Value
RNA id XM_039812890.1
length 3174
RNA type mRNA
GC content 0.50
exon number 15
gene id fermt3b
representative True

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 23158369 ~ 23173854 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

AGAAGTGACAcaagcagcacagacacagcCTCACAAACCACAACCTGCCCAGCCCGCGAGAGGAGAAACTGCTGCACTTTTTCACCGAAAACTTGGTAAACTTCTTCAGAGATCTGACGACAAGGGTCCCCCAGTTTCCATTTCTCAAAACCTTGGACAGAGGAGACTGACGACCTCGTATGGCGGCGTGGGATCTGTCAGTCACAGTGGAGGACCTGGGGTCTGATGCGCCACCTGTCACCATCAGCGTGGACTCTGGCCTCCATGTCGGAGGGGTCATCCTGAAGCTGGTGGAAAAGACACAGATAAAGCGTGATTGGTCGGACCATGCCCTGTGGTGGGAGCAGAAGCAGCGGTGGCTGCTGCGAACAGCCTGGACTCTGGACAAATATGGCATCCACGCCGACGCCCGGCTGGTCTTCATGCCTCAACACAAGCCCCTAAGGCTGGGTCTGCCCAACGGCATTACCCTGAGGCTCCGAGCCTGCTTCTCCAGCTCCGTCTTCCAGACGGTGATGGGCATTTGCAGAATGCTGAATATCCGTCACCCCGAGGAGCTCTCGCTCCTTCAGCCCgtagaggagaaaaagaagaagaaagataaAAACTCGGCTGAGGAGATCTACGACCTGACCGAGGTGCCCCTCTCCTCGGCATCCCGGCCCTGTCTGTATAATGGCATGCCGGCTCACTTTGCGGACTCACCTGAGATGGAGGCCATCTACAAGATGCTGTCTGTCACCCAGCCTCCGCCCTCCCCCGAGGTCATAGCCAAGCAGTACCGCGCAGCCAGTGTGGTGGACAAGGCCCACATCCACGGCAGGTGGTTGGACTCATCCCGGTGTCTCCTGCAGCAGGGCATCCAAGAAAATAGCAGACTCTGGCTGCGCTTCAAATACTTTGCTTTCTATGATATGGAACCcaagTATGATGTTGTGCGTCTGACCCAGCTGTATGAGCAGGCGCGCTGGGCGATCCTGCTGGAGGACATTGACTGCACCGAGGAGGAGATGATGCTGTTTGGAGCTCTACAGTATCACATAAGTAAGGTGTCTCAGTCGGAGCCCCAGATGCTGAGCTCCAGTGCAGCCATGGACGACCTGGAGACCGCCCTGCAGTCCCTGGAGGtcaagatggagggagagagcagCTCCGCGTCCGAGATGCTGGAAAACATGACTGCACCAGAACTCAACGACTATCTAAAGATATTCAGGCCAAAGCGAATGACTCTGAAGGGATATAAGCAGTACTGGTTCAAGTTCCAGGATACCTCCATTTCTTATTTCAAGAGCAAAGAGGAGAGCATCGGAGAGCCCATTCAACAGATTAACCTCAAAGGTTGTGAGGTGGCACCGGACGTTAACGTGACAGCACAGAAGTTCCTAATCAGACTCCTGATACCAGCGCCTGAGGGCATGAACGAGGTCTATCTGCGCTGTGAAAACGTGAGaaaaaaacacgcacacacacacgcacatTGGATGGCTGGGTGTCGACTGGCCTCCAAAGGCAAGAGTCTGGCCGACAGCAGTTTCCAGAGTGAGATCCAGAGCATCCGGTCCTTCCTGGCTATGCAAAAGACCAGCCCCGGTACCCATGGCAACGCACCTGCCAACGATGAAAGCCTCAATACTCACAGTCTGGTGTCGCCACGCTACGCTAAGAAGTACAAAGCCAAACAGCTGACCCCTCGTATCCTGGATGCATACCAGAACGTGGCTCAGCTCTCACTGACAGATGCGGTGATGCGCTTCCTGCAGATCTGGCAAGCCCTGCCCGATTTTGGACTCTCATATGTCGTTGTCAGGTTTAAGGGCAGTCGTAAAGACGAGGTACTGGGCATTGGTCCCAACCGTCTGATCCGTATCGACCTGGCAGTGGGCGATGTGGTGAAGACCTGGCGTTACAACAACATGAAGCAATGGAATGTCAACTGGGACATACGACAGGTGGCTATTGAGTTTGAAGGCAACATCAACATTGCTTTTGCCTGCGTGACTGCTGACTGCAAAATCGTTCATGAGTTTATTGGAGGCTACATTTTCATGTCGACGCGCAGTCGTGCGAAGAGCGACACTCTCAATGAGGAGCTTTTCCACAAGCTGACCGGCGGCCACGACGCCCTCTAAGACTAAAACGCACAAACACAGAGGAGAAGAGGGGAAACCATGTGGAATTGGATTTTATGGCGCAATCAGGCAAACACAACAACGACAAAATAAGATATTCTGttcatgtgtgaatgtgttacAACCCGCCTCGTCAGTCCATCTAAGTTTTTCCACAgcctttgacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacttcaagaCCCTGGTGGTCCTCATGCTGACTTCCCCTTTACTTCAGAATGGACTGCTACTTGTCCAAACTGCTAGACATCTGGTCCAGGATCAGCAAGCTTGACACTCAAACTCATGGCAATGCAAAATCAACCGTTGCATCAGCCAGAAGCAACTTTTCTGTTTCGCCTCACAGTATCCAGAGTTCCTGTCAATTCGGATAGAAAGCCTTGCTTTGTCCAAAGCTGCAGTCTCATTGTCAGCAGCCACAGGATCAACAGCAATGAGTAGAaaaacacatgtaaacacaaaaACTTATGAATAAcaacaaactaaaataaaataataaaataaatacagcaatTTCCTTTTAATTCTCTGTTGTCTTCACTCCTTATGTCCGTGACATATGGTGGgatttctgttgttgttttttcacacAGGAAGCTTCTAACCGTTTATCTCCCCtcacatgctgtgtgtgtgtctatatctTACAAGAAACTGTTACAGAAGTCCGTTAACTAAAACCACAGTGTCTGTATCCTCTGCTTTCCCATACTCAGTCAAGTGACTCCTCACACATACAATATATCTAGGCCCGGCTGCCAGCAGCCAGTGTGTCGGTTTGTGACCAGGGTTATATATTTTACAACTGCGTGGTGAAATTATCTTGGTAGTTAATGTGTGCTATAGTTTATTTAGCACTTACAATGGAGAAGACAAAGCCTCTATACTTGtaaataaaaagtgagatttgCCAGCA

Function

GO: NA

KEGG:

id description
K17084 FERMT3, KIND3; kindlin 3

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU144112 lncRNA upstream 31235 23100041 ~ 23127134 (+) False flrt1b
TU144034 lncRNA upstream 161331 22950595 ~ 22997038 (+) False rom1b
TU144039 lncRNA upstream 199789 22958158 ~ 22958580 (+) True G107203
TU144017 lncRNA upstream 201470 22919853 ~ 22956899 (+) False G107185
TU144024 lncRNA upstream 226207 22929269 ~ 22932162 (+) True G107191
TU144140 lncRNA downstream 63397 23237251 ~ 23237450 (+) True G107276
TU144215 lncRNA downstream 96945 23270799 ~ 23271221 (+) True G107334
TU144222 lncRNA downstream 109125 23282979 ~ 23285214 (+) True G107341
TU144221 lncRNA downstream 111509 23285363 ~ 23287678 (+) True G107340
TU144238 lncRNA downstream 145538 23319392 ~ 23320649 (+) True G107353
XM_039812863.1 mRNA upstream 25684 23100025 ~ 23132685 (+) False flrt1b
XM_039812861.1 mRNA upstream 25684 23106206 ~ 23132685 (+) True flrt1b
XM_039813822.1 mRNA upstream 118931 22998526 ~ 23039438 (+) False ccdc88b
XM_039813823.1 mRNA upstream 118931 22998529 ~ 23039438 (+) True ccdc88b
XM_039813821.1 mRNA upstream 118931 22998529 ~ 23039438 (+) False ccdc88b
XM_039812875.1 mRNA downstream 2984 23176838 ~ 23182934 (+) True zbtb3
XM_039812874.1 mRNA downstream 2985 23176839 ~ 23182934 (+) False zbtb3
XM_039812878.1 mRNA downstream 2985 23176839 ~ 23182934 (+) False zbtb3
XM_039812877.1 mRNA downstream 3852 23177706 ~ 23182934 (+) False zbtb3
XM_039812883.1 mRNA downstream 14182 23188036 ~ 23193053 (+) True LOC120566426
TU143997 other upstream 184608 22954972 ~ 22973761 (+) True G107168
TU143990 other upstream 292693 22862190 ~ 22865676 (+) True G107163
XR_005640584.1 other upstream 1696919 21448804 ~ 21461450 (+) False stx3a
TU143018 other upstream 2806202 20351721 ~ 20352167 (+) True G106465
XR_005640374.1 other upstream 3097031 20043031 ~ 20061338 (+) False LOC120566323
TU144145 other downstream 84417 23258271 ~ 23262229 (+) False tgfb5
TU144214 other downstream 94937 23268791 ~ 23270216 (+) True G107333
TU144280 other downstream 280713 23454567 ~ 23466184 (+) False ubl3b
TU144289 other downstream 314447 23488301 ~ 23491358 (+) False LOC120566905
TU144290 other downstream 314447 23488301 ~ 23491358 (+) False LOC120566905

Expression Profile