RNA id: XM_039812922.1


Basic Information

Item Value
RNA id XM_039812922.1
length 2856
RNA type mRNA
GC content 0.45
exon number 2
gene id slc25a51b
representative True

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 19464471 ~ 19469408 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

TGCATTGCTGCGGTCACCTGCCGCTGTTGGGGCTGCAGACCGACCAAACACGACCTACCGTTTGTTGTGGCCGTTGGCCCAATTACCCTGCAGAAAACTGCACTCTACCTGTCCAGGATTAGGACAACGTCTGGCGTAAACGGCAGGGTTTATATTTTACAAAAGAGTGCAGTGTTGATGTGATGCTGAAGGAATAGGCTGTGGAGCACTGAGTCTTCCATGGCTGTTAGCACCATGGACTCGGAGTCAGCCCGGACACCTCAGCCTCAGGCTGCCCTGACTATAGGAGGTCCCTCCCTGCTGCCTGCTGATGCTCTGAGTGCCAGGCCAGGCACTCAAGGGAAGCACTATGTCTGCGGCTCCATTGCAGCTTTTTCCAACATCTTGGTGACTTTCCCCATCCAGAAGGTGCTGTTCCGCCAGCAGCTGCACGGTGTGTTGGCCACTGAGGCGGTGCGGCAGCTCCAGAGGGATGGGCTAAGGAATCTTTACCGGGGCCTGCTGCCCCCGCTGCTCCAAAAGAGCACTACAGTTGCCATCATGTTTGGCCTGTACGAGGACTTCTCTAGAGTTTTACTAGACCAGGCTGGTGGCAGCGGTGTGCCGGACCTGGTCACCCGAAGCTTTGCTGCAGCGTTGGCAGGAACCGCAGAGGCCATCCTGACGCCATTTGAGCGCGTGCAGACTCTCCTGCAAGACCATCGGCACCACGGGCGCTTCAACAACACAGTCCACACCTTCCGGACACTTCTTACTGAGTATGGTGTCAGAGAATGCTACCGTGGCCTGGTGCCCATACTTCTCCGTAATGGCCCTAGCAATGTGTTCTTCTTCGGGCTCCGCGGGCCCATTAAGGAGCAGCTCCCAGAAGTCACTAGTCGGGCAGGTCACATGGTGAATGATTTTGTGTGTGGAGGTTTGTTGGGGGCAGCCCTTGGCATCATGTTCTATCCATTAAATGTGGTCAAGTCCCGGGCTCAGTCCCAGGTCGGTGGAGACTTCCAGCCTTGCAGGAAGGTGCTGCTAACagtgtggagagagaggggtggcaGTCTGGCCATGCTCTTCAGAGGGGCCCACCTTAACTACCACCGTTCACTCCTCTCCTGGGGGATCATCAATGCCACCTACGAGCTGCTGCTGAAGCTCATGTAAGAGGGAGAATGGATATGACGAAAGAAGAGATctagagaggaggagaaagcaTTTTAAAAGGGGAAAAACCTGTATGGAGTGATGGAACCAGTTTGTTGAGAAGAAAGGAAATCGTAAAGTAAAGCCGATGCACTTGCTGTCTGGCCCTATTTTGGTACACTAGGGTTTCCATGATTTAAAGACAGCAGGGAAGTTGCACTTCTGACAGGGGCCAACAGTCAGTGTGAAATAAGCCACCTGCCACATGCCATGACTATTTATTGTtgtcaaaatatttaaaataaaaaacaagtcACACGCTTTAGCCTATACAAAACTTGTGCCAGGGTCCAATTAAAATGCCCTTGTTTGCTCTCTGTACAGAAATGTTGTGGAGCATTACTTGACAGCGCTTTACTTGACTGGATAAGCTGTTTCTTTGTATGTGCCGTGTGCTGTGGTGTTTTGTAGACAACATccatctttttgtttgtttgtttgaagaGGTATTCTGTGAGGCTGAATTCTGCCACTTAACTGAAACACTTTTGTACTTTTGACCGTTGAAATTCCCCAACATTTATTGTCAAGGAGAGTGTAATAAATTGAGTGTTGgccattttatttctctttatgCTCCATCTCCACTTATTTGGCCTTCATGTTTATGAGATCAAAAGGCTGATACTTAAGGCACTGTTGAGATGACTATCAGGTATATACATGTTGTTGGAAATATTGTCTAGCAGATACACGTAGGCTAATTCTTAAacattttttcctttcaaacaCATGATTTGTCTTTGCCAATTGGAACTGAAATGTTTTGTCAAGCActatttttattgcttttatgaAGTGCTTCTGGCTTGTGTTATTCAAGTTTTGGCCGTTCATGTCAGTTAAACATAGTGACACTGAGatcttgtgttgtttttatcaTTCATTGGAAGGGAGAGTTGCTACAAATAATCCCACAGAAAATGTTTGCTCTTTgtttaaaatatacattttaagaaaacttttgcagtttcagaaaaagaCCTTTTGATATTAATTTGACTGTGCACCATTGCTGCATTTGTTCATTTGTGGGTTATTGTTCACTTATTGACTATACAACTAAGTGCTCCTCAgtgtttgtttcctttttataaACTTTAATATCACTTGTTTTATACAtgtatctctctccctctactcCCTATTTTCATATATATTTCCTTCTCTCACGCTTGCTCTAATTCTGTCCTGTAACATCTGTTGACATAATGGGCTCAGATTTCAGGCTTGAGTAAATACTGTCACCACGCAGCAGCTCACGGTGGGTATGACAGCCCAAAGATGGCATGCTGCCTGGACACTGAACAGTAATGTGCTGAGAGAAGACCGGGGCAGAGGGAAATGTTCAGTTGCACAAAAAGCTCAAGCTGCCATGTAAATGGATCATTTGGCCTATTTCTTCAATTCTTTACACTTTGGACTGTCCACAGTGTGCTGTTTCCTAAGCATCTTTTCAGGATTTTCCTGGGTTTCCACTTTGAAAGTAAGACTTTTGAATTGGGTTTTGAAAGTGGGACACCCTTGCACATATTAAATAATGCCGTTTCTAATTACCACTTCTCCTGAAGCACAAGTCACTGAGTCACTATGAAAATGTCCATTTAATAATTgcaatgaaattaaatgtttaaaatcaaTCCATTAAAAAGGTTGATAGTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU142712 lncRNA downstream 14347 19399648 ~ 19450124 (-) True G106259
TU142749 lncRNA downstream 27554 19435840 ~ 19436917 (-) False tomm5
TU142713 lncRNA downstream 63976 19340494 ~ 19400495 (-) False G106259
TU142731 lncRNA downstream 68477 19394810 ~ 19395994 (-) True G106276
TU142699 lncRNA downstream 143165 19320263 ~ 19321306 (-) True G106248
TU142770 lncRNA upstream 7760 19477168 ~ 19497081 (-) False G106303
TU142771 lncRNA upstream 25797 19495205 ~ 19557572 (-) True G106303
TU142831 lncRNA upstream 387688 19857096 ~ 19857367 (-) True G106349
TU142887 lncRNA upstream 476247 19945655 ~ 20052690 (-) True G106378
TU142872 lncRNA upstream 492546 19961954 ~ 20007579 (-) True G106367
XM_039812915.1 mRNA downstream 27544 19435839 ~ 19436927 (-) True tomm5
XM_039812909.1 mRNA downstream 29276 19432316 ~ 19435195 (-) True LOC120566441
XM_039812910.1 mRNA downstream 37609 19414668 ~ 19426862 (-) True si:ch211-203d1.3
XM_039812911.1 mRNA downstream 38839 19414668 ~ 19425632 (-) False si:ch211-203d1.3
XM_039814357.1 mRNA downstream 79499 19376204 ~ 19384972 (-) True LOC120567397
XM_039812919.1 mRNA upstream 8522 19477930 ~ 19482625 (-) True tlr1
XM_039812928.1 mRNA upstream 59014 19528422 ~ 19565877 (-) True LOC120566455
XM_039812930.1 mRNA upstream 59014 19528422 ~ 19555712 (-) False LOC120566455
XM_039812932.1 mRNA upstream 59014 19528422 ~ 19555710 (-) False LOC120566455
XM_039812931.1 mRNA upstream 59014 19528422 ~ 19555710 (-) False LOC120566455
TU142573 other downstream 245327 19215989 ~ 19219144 (-) False LOC120566717
TU142417 other downstream 773061 18687788 ~ 18691410 (-) True LOC120566257
TU142254 other downstream 1158776 18303269 ~ 18305695 (-) False reep2
TU142092 other downstream 1472600 17987258 ~ 17991871 (-) False sfxn1
TU142030 other downstream 1669248 17783560 ~ 17795223 (-) False LOC120567448
TU142773 other upstream 10610 19480018 ~ 19482558 (-) False tlr1
TU142874 other upstream 503007 19972415 ~ 19981133 (-) False fgf18a
TU142968 other upstream 761500 20230908 ~ 20233924 (-) True G106443
TU143328 other upstream 1658430 21127838 ~ 21130970 (-) True G106728
TU143775 other upstream 2320845 21790253 ~ 21790725 (-) True G106988

Expression Profile