RNA id: XM_039813050.1


Basic Information

Item Value
RNA id XM_039813050.1
length 1379
RNA type mRNA
GC content 0.45
exon number 2
gene id fbxl3l
representative True

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 17959879 ~ 17968780 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

CTCCACACTGCTGCGTCACAGTCAAGGGGCGGAGCTGCAATCAGCAAATCCAATGACCAGTGCCATGGACTCAGGGAGCTGGCGTTGAGCTTCCATCTCCTGAGTGATGAGCTCCTGCTTGCCCTCTCCTCTGAAAAACCCATCCACTTAGAGCACCTACGCATTGCAGACACACTTTCACACCATTCAAAAGAACCAGCTGGGAGGCTTTGGTCCGACACTCACCCAAGGTCAACATCGTCATGTATTTTTTCCTTATATAAGGAGTTTGAGCCCTTCTTCCGCAAGGAGACTCCTGTCACCTACCTGTACTTTGGCCGGGCAGTTACCAAAGAGATGCTGGGCCGTATCGGACTGAACTGCCCTTGGCCTTCAGCCCCTGCATGACCGCTGCAAAAGCTTGACTGCCATCGGGGTAAGCGAGTGTGAAGTGACCTGCAGTGGCTTATGGAGTTTGTTAAGATGTGAGGGGGCAGGCTGactcagctgtcaatcatggaGGATGTGTTGATCCcagacagcagcaacagcatGGAGCAGATTTACAGTGAGGTGTCCAAGCACATGGGTAGCATGTGGTTCCCTGATATGATGCCCACCTGGTAGGCTGAGATGAAGCCAGAGTGGAGGGCTGCAGTGTGATGTGCTCTTTTTGGACAGTAAGTAAGCAACAGAAAGTTTCCCTGTCATCAGTGTTCTTGGCCAGCTTACTAGAAGGTGGGTAATTTCTAAAGCTGTCACTTCTATTTTTACCTAAATTTGATGTTagactgaaaatgttttctcacTTAAAACATTGGCAGATTGATTTCTGTCTGGCTATCTTGTGAGCACTCAGCTTTCTCTCTGTGCATTGATATTGTGATGTGAAATCTTTGATTCTTCCATCTGTGAAGCACAGTCTGAATTTACTGTCACTCACTGCAACCTTTCAACCATTGTGTGTCAAGGATGTGGATCTGCCATCTGCTGGTTGCTTATTTTAAAAGCATCACACTTCATCATTTATTCTGAACAGCATCTCCCACAATATCATCAGTGTATGTTGTTCAGTGAATtccaagttttattttgtggtgaAATGTTGTTCTTTATCTTATTGCTATCCCTCTTCCCAGGATACAGTTTGAGAGGCAGAGACCCAATCTGGAGTTGGGGCATCCTGTCGTTGGTAGAGAGAGCACTAACAATTGTGGTACTAATGCAGTACAGGAGAGAACAAGAGTTTACAGTTGAGTCAGAGCAAGAGTTGCACCTTCATGTAAAACACAATGGGTATTTTGTAATCTTGTCTATTTATGTTTGTGTCAGTGGAGACTTTAATATTTCATCCTAAACTACAACGTTTTAAGTTGGTTATTTTTGGACATCCCTGTTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU142063 lncRNA downstream 26409 17928832 ~ 17933470 (-) True G105784
TU142040 lncRNA downstream 77885 17879516 ~ 17881994 (-) True G105769
TU142043 lncRNA downstream 80758 17877032 ~ 17879121 (-) False G105769
TU142039 lncRNA downstream 83584 17874836 ~ 17876295 (-) True G105768
TU142018 lncRNA downstream 100193 17857084 ~ 17859686 (-) False LOC120566288
TU142089 lncRNA upstream 9532 17978312 ~ 17980298 (-) True G105806
TU142111 lncRNA upstream 46671 18015451 ~ 18015927 (-) True G105820
TU142119 lncRNA upstream 53657 18022437 ~ 18023896 (-) True G105827
TU142127 lncRNA upstream 64627 18033407 ~ 18035248 (-) True G105834
TU142128 lncRNA upstream 66602 18035382 ~ 18035757 (-) True G105835
XM_039813049.1 mRNA downstream 88310 17870202 ~ 17871569 (-) True sowahab
XM_039814240.1 mRNA downstream 95725 17860860 ~ 17864154 (-) True gdf9
XM_039812632.1 mRNA downstream 100124 17857117 ~ 17859755 (-) True LOC120566288
XM_039813923.1 mRNA downstream 103503 17847776 ~ 17856376 (-) True hspa4b
XM_039813411.1 mRNA downstream 113325 17843883 ~ 17846554 (-) True gnpda1
XM_039814377.1 mRNA upstream 18416 17987196 ~ 17995350 (-) True sfxn1
XM_039814379.1 mRNA upstream 27195 17995975 ~ 18000829 (-) False LOC120567416
XM_039814380.1 mRNA upstream 27195 17995975 ~ 18000677 (-) False LOC120567416
XM_039814378.1 mRNA upstream 27195 17995975 ~ 17999329 (-) True LOC120567416
XM_039812742.1 mRNA upstream 98645 18067425 ~ 18068492 (-) True LOC120566360
TU142030 other downstream 164656 17783560 ~ 17795223 (-) False LOC120567448
XR_005640507.1 other downstream 382068 17522141 ~ 17577811 (-) False nexmifb
TU141756 other downstream 808311 17142146 ~ 17151568 (-) False tmsb1
TU141625 other downstream 996405 16957662 ~ 16963474 (-) False rab9b
XR_005640433.1 other downstream 1285024 16592908 ~ 16674855 (-) False gria3b
TU142092 other upstream 18478 17987258 ~ 17991871 (-) False sfxn1
TU142254 other upstream 334489 18303269 ~ 18305695 (-) False reep2
TU142417 other upstream 719008 18687788 ~ 18691410 (-) True LOC120566257
TU142573 other upstream 1247209 19215989 ~ 19219144 (-) False LOC120566717
TU142773 other upstream 1511238 19480018 ~ 19482558 (-) False tlr1

Expression Profile