Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_039813268.1 |
| length | 728 |
| RNA type | mRNA |
| GC content | 0.42 |
| exon number | 6 |
| gene id | ube2a |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053121.1 |
| NCBI id | CM020918.1 |
| chromosome length | 40300294 |
| location | 25316298 ~ 25320522 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0006301 | postreplication repair | biological_process |
| GO:0060135 | maternal process involved in female pregnancy | biological_process |
| GO:0033522 | histone H2A ubiquitination | biological_process |
| GO:0009411 | response to UV | biological_process |
| GO:0008284 | positive regulation of cell population proliferation | biological_process |
| GO:0051865 | protein autoubiquitination | biological_process |
| GO:0006511 | ubiquitin-dependent protein catabolic process | biological_process |
| GO:0070936 | protein K48-linked ubiquitination | biological_process |
| GO:0070979 | protein K11-linked ubiquitination | biological_process |
| GO:0002474 | antigen processing and presentation of peptide antigen via MHC class I | biological_process |
| GO:0001701 | in utero embryonic development | biological_process |
| GO:0001741 | XY body | cellular_component |
| GO:0005829 | cytosol | cellular_component |
| GO:0033503 | HULC complex | cellular_component |
| GO:0005524 | ATP binding | molecular_function |
| GO:0004842 | ubiquitin-protein transferase activity | molecular_function |
| GO:0031625 | ubiquitin protein ligase binding | molecular_function |
| id | description |
|---|---|
| K10573 | UBE2A, UBC2, RAD6A; ubiquitin-conjugating enzyme E2 A |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU145122 | lncRNA | downstream | 19032 | 25291617 ~ 25297266 (-) | True | G107992 |
| TU145077 | lncRNA | downstream | 51436 | 25263179 ~ 25264862 (-) | False | ndufa1 |
| TU145020 | lncRNA | downstream | 129820 | 25180938 ~ 25186478 (-) | True | G107923 |
| TU145024 | lncRNA | downstream | 129820 | 25180938 ~ 25186478 (-) | False | G107923 |
| TU144993 | lncRNA | downstream | 242466 | 25073181 ~ 25073832 (-) | True | G107907 |
| TU145172 | lncRNA | upstream | 328012 | 25648534 ~ 25648780 (-) | True | G108031 |
| TU145177 | lncRNA | upstream | 359570 | 25680092 ~ 25680437 (-) | True | G108036 |
| TU145181 | lncRNA | upstream | 454060 | 25774582 ~ 25774823 (-) | True | G108040 |
| TU145209 | lncRNA | upstream | 516808 | 25837330 ~ 25839330 (-) | False | diaph2 |
| TU145213 | lncRNA | upstream | 516808 | 25837330 ~ 25838530 (-) | False | diaph2 |
| XM_039813252.1 | mRNA | downstream | 26164 | 25284705 ~ 25290134 (-) | True | pttg1 |
| XM_039813251.1 | mRNA | downstream | 31733 | 25282801 ~ 25284565 (-) | True | sowahd |
| XM_039813625.1 | mRNA | downstream | 51434 | 25263172 ~ 25264864 (-) | True | ndufa1 |
| XM_039813585.1 | mRNA | downstream | 58666 | 25252765 ~ 25257632 (-) | True | zbtb33 |
| XM_039813267.1 | mRNA | upstream | 45648 | 25366170 ~ 25432527 (-) | True | tnmd |
| XM_039812941.1 | mRNA | upstream | 516808 | 25837330 ~ 26258199 (-) | True | diaph2 |
| XM_039813376.1 | mRNA | upstream | 1137480 | 26458002 ~ 26460732 (-) | True | rpl36a |
| XM_039813375.1 | mRNA | upstream | 1158369 | 26478891 ~ 26483763 (-) | False | zgc:101583 |
| XM_039813374.1 | mRNA | upstream | 1158369 | 26478891 ~ 26482962 (-) | True | zgc:101583 |
| TU145117 | other | downstream | 28212 | 25279603 ~ 25288086 (-) | True | G107989 |
| TU145115 | other | downstream | 34099 | 25279603 ~ 25282199 (-) | False | G107989 |
| unassigned_transcript_475 | other | downstream | 454114 | 24862112 ~ 24862184 (-) | False | trnav-uac_15 |
| TU144931 | other | downstream | 737199 | 24573441 ~ 24579099 (-) | True | G107864 |
| XR_005640439.1 | other | downstream | 1423997 | 23886824 ~ 23892301 (-) | False | rab41 |
| TU145230 | other | upstream | 1137473 | 26457995 ~ 26460707 (-) | False | rpl36a |
| TU145357 | other | upstream | 1668742 | 26989264 ~ 27001011 (-) | True | G108181 |
| TU145368 | other | upstream | 1744896 | 27065418 ~ 27065947 (-) | True | G108191 |
| TU145467 | other | upstream | 1937725 | 27258247 ~ 27262120 (-) | False | LOC120567151 |
| unassigned_transcript_477 | other | upstream | 2458611 | 27779133 ~ 27779214 (-) | True | trnal-aag_2 |
