RNA id: XM_039813544.1


Basic Information

Item Value
RNA id XM_039813544.1
length 1829
RNA type mRNA
GC content 0.41
exon number 8
gene id tmem33
representative True

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 31322365 ~ 31332549 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

CGCTCCTTCTCAAATCTCGCGAGAGACATTTTCCTTTTGAAGGCCAGCTGATAATTTCCTTCGGTGTGGTGACTAGCCTGACGCTTTTAAGTAAACGCGACGTTGACGCTGTAATACTGAGCAACCAACACTTCCAAAGATGGCTGACACAAACCAACAAAGTCCTCCTCCCCAGCTAGGGCCTGTGCAATTTTTAATGAGTAACAAGCTGGAAACTGCAATGTGGCTTTCACGACTCTTTACCGTCTATTGCTCAGTAATGTTTATTCTACCAATTTTGGGACCCTATGCAGCAGCTAACTTCTATCAGCGAGCCTTGTTGGCGAACGCCCTCACCAGTGCCCTTCGCTTGCATCAAAGGCTTCCACGCTTTCAGCTGAGCAGAGCTTTCTTGGCCCAGGCTCTTCAGGAGGATAGCTGCCATTACCTGCTCTACTCACTCATCCTGGTCAACTCCTACCCCATCACAATGAGCATCTTTCCAGTCTTCCTCTTCTCCGTGCTTCATGCAACTACCTACACAAAGAAAGTCCTTGATTCTGTGGGCCCcaacagcatgatgttcatcaGAAACCTCCTGGACAAACTTACATCCAATCAGCAGAACATCCTGAAGTTTATCGCCTGCAATGAGATCTTCTTGATGCCAGCCACTGTTTTTATGCTCTTTAGCGGACAGGGGAGCTTGCTGCTGCCTTTTATTTACTACCGATTCCTCACCCTCCGCTACACATCCAGAAGAAACCCATACTGCCGCACCTTGTTCACAGAGCTGCGAATTCTTCTGGAGCACTTCATCATGAAGCCTGCCTGCCCCACCTTCTTCAGGAAGATGTGCCTCAGCAGTATCGCCTTCATCAGCCGCCTCGCTCCCACAGGGGTCTGATTACTCcataaaagttctgttttttgttttgtttttttgttccaCCACTTAAGATGCGACTTAAACTTTGATGAGGACAGACATTGCCATCAACAGAAGGAACTGTTTTTTGAATGTCAACTTTACAGCCTGTGCTCCAACTTCTCTGTAAATGAGTGCAGTTGAAGAGCAGCCAGTAATGCACTGAAGTCTCATGGTGATATTTCCTTCCCATGTTCTTAATGTGACCTCATTCAAGCGGTGGACACCCCTAACTTTGTTACGTTCGCTGAATGCAGCACGGTAGACAACTGTGATCTGTATGTACCGGCTGTTATTTGTTCCTTTTTATGTCCTTATTTATTCATGAAATCACTTATTCTGTGATGAAACATTAACATTCTGAGATTAGtaacttaaattaaaatgtggttctacattgttaaaaatgtttgttttttttaatgatcatGTGCTTGGATGGGTGGAGGATGGGGTTTGTTTGCAGCTTCTATGTGGTCCAAcgtcttttatttcttttgtttaaagCATCCTATTATTTGATTTGTCTAAATGCCTAACTTTAAATGTATTCTATCAATGCCATCAACTCACTCTTTTAACAAATTAGATCTATGAAGGTATGAAGGTATGATGTCAAAATGGGTGTTGAATTGAGAAACAAGATATCTGCTGTATTTTTGAGAATATTTGAAGGTAACAGACATTTTGCTGTGGGATTCATATGTGAAATGAGTTGCACAATGCCTGTCATGTTTTCAATGCGTTCTTACTTGTTTCTCAGTTTGAAAGCTGTTTTGAATGTGcttcatttatttagttttcttgctctgatttatttttctgccatgttaaatgtgttttatttgcctaCAAACCACATTTTTATGACAAGAATAAAATGATCTCTTAATTAAAccaataaaatattaaagaagAGTAA

Function

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K20724 TMEM33; transmembrane protein 33

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU146291 lncRNA downstream 86548 31220092 ~ 31235817 (-) True G108854
TU146248 lncRNA downstream 146906 31174863 ~ 31175459 (-) True G108840
TU146236 lncRNA downstream 190706 31130263 ~ 31131659 (-) True G108828
TU146211 lncRNA downstream 317879 31002648 ~ 31004486 (-) True G108810
TU146179 lncRNA downstream 588595 30733559 ~ 30733770 (-) True G108785
XR_005640385.1 lncRNA upstream 42805 31375354 ~ 31380353 (-) True LOC120566353
TU146378 lncRNA upstream 98471 31431020 ~ 31432903 (-) False LOC120566557
TU146379 lncRNA upstream 98471 31431020 ~ 31442247 (-) False LOC120566557
TU146467 lncRNA upstream 562694 31895243 ~ 31966892 (-) True G108977
TU146498 lncRNA upstream 661597 31994146 ~ 31996173 (-) True G109007
XM_039813543.1 mRNA downstream 1153 31315122 ~ 31321212 (-) True bbs7
XM_039813542.1 mRNA downstream 9198 31309545 ~ 31313167 (-) True ccna2
XM_039813772.1 mRNA downstream 21870 31271226 ~ 31300495 (-) False anxa5a
XM_039813771.1 mRNA downstream 21870 31274036 ~ 31300495 (-) True anxa5a
XM_039813229.1 mRNA downstream 348080 30799237 ~ 30974285 (-) True fstl5
XM_039812841.1 mRNA upstream 52541 31385090 ~ 31423480 (-) False LOC120566409
XM_039812840.1 mRNA upstream 52541 31385090 ~ 31423480 (-) False LOC120566409
XM_039812838.1 mRNA upstream 52541 31385090 ~ 31423480 (-) False LOC120566409
XM_039812839.1 mRNA upstream 52541 31385090 ~ 31423480 (-) False LOC120566409
XM_039812832.1 mRNA upstream 52541 31385090 ~ 31423480 (-) False LOC120566409
TU146169 other downstream 651516 30669531 ~ 30670849 (-) True G108781
TU146164 other downstream 660742 30660912 ~ 30661623 (-) True G108777
TU145691 other downstream 3299136 28021737 ~ 28023229 (-) True G108433
TU145627 other downstream 3483258 27837848 ~ 27839107 (-) False LOC120567057
XR_005640397.1 other upstream 55158 31387707 ~ 31423481 (-) False LOC120566409
TU146377 other upstream 98471 31431020 ~ 31485976 (-) True LOC120566557
TU146455 other upstream 506993 31839542 ~ 31844234 (-) False tlx2
XR_005640453.1 other upstream 1631191 32963740 ~ 32979661 (-) False slc49a3
TU146990 other upstream 3102189 34434738 ~ 34457330 (-) True G109390

Expression Profile