RNA id: XM_039813645.1



Basic Information


Item Value
RNA id XM_039813645.1
length 1257
RNA type mRNA
GC content 0.49
exon number 4
gene id slc25a5
representative True

Chromosome Information


Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 23643288 ~ 23645496 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


CTAATTAAATCGCCTCTCTTCTAGTTAGGAGTCGGCCATTTCAACTCCACCGGCAAACCCCACCGACTAAAGTAACAGAACTGTGTCTGATAACATCTGAAGATGAGTGAGACAGCTATTTCCTTCGCCAAGGACTTCTTGGCTGGTGGCATCGCCGCTGCCATCTCCAAAACAGCTGTAGCCCCCATCGAGAGAGTCAAGCTTCTTCTCCAGGTACAACATGCCAGCAAACAGATTACAGCTGCCACACAGTACAAGGGCATTATGGACTGTGTCGTCCGCATCCCCAAAGAGCAGGGCTTCCTCTCATTCTGGAGAGGGAACCTCGCCAACGTCATCCGATACTTCCCCACTCAGGCCCTCAACTTTGCTTTCAAGGATAAGTACAAGAAGATTTTTCTCGATGGCGTGGACAAGCGCACACAGTTCTGGAGATACTTTGCGGGTAACCTAGCGTCTGGTGGCGCCGCCGGAGCCACTTCCCTCTGTTTTGTCTACCCCCTCGACTTCGCCAGAACACGTCTGGCTGCTGATGTTGGCAAATCCGGACAGGGGCGTGAGTTCAAAGGCCTGGGAGACTGTTTGGTGAAGATCTTCAGGTCTGATGGCCTCAAGGGTCTGTACCAGGGCTTCAACGTGTCAGTACAGGGCATCATCATCTACAGAGCCGCTTACTTTGGCGTCTACGACACGGCTAAGGGCATGCTTCCAGACCCcaagaacacacacatttttataaGCTGGATGATTGCTCAGACTGTGACTGCATGCGCTGGTTTTGTGTCCTATCCCTTCGACACTGTCCGTCGTCGTATGATGATGCAGTCTGGACGCAAAGGAGCCGACATCATGTACACTGGCACCATTGACTGCTGGAAGAAGATTGCACGTGACGAAGGCCCCAAGGCCTTCTTCAAGGGAGCCTGGTCTAATGTGCTCCGAGGCATGGGTGGCGCCTTCGTGCTTGTCTTGTATGATGAGCTTAAGAAAGTCCTCTaagttgtttttatatgttCACTGTTCATGTTGTGAAATTTTACTGTAACATATCTTGTACATTTCGGAAGAATTTAAATGCCAGGCTATATTTATAGGGACCAACTAGTATTTTCTACTAGTTGCACAGGGGGAATCTGTTATGCGCTTCTCTCTTggcccatgtttttttttcttttgcctcTTACCAGAATGTCATTCCCTGAACACAGGAACCTTGccgaaaaaagagaaataaacacAACCTACTGAGTGAATCTC

Function


GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0005743 mitochondrial inner membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005215 transporter activity molecular_function

KEGG:

id description
K05863 SLC25A4S, ANT; solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU144202 lncRNA downstream 379389 23242037 ~ 23263899 (-) False G107324
TU144201 lncRNA downstream 399348 23242037 ~ 23243940 (-) True G107324
TU144152 lncRNA downstream 418832 23170148 ~ 23224456 (-) True G107282
TU144160 lncRNA downstream 461571 23179692 ~ 23181717 (-) True G107290
TU144149 lncRNA downstream 469870 23092565 ~ 23173418 (-) False trpt1
TU144586 lncRNA upstream 146558 23792054 ~ 23792502 (-) True G107610
TU144596 lncRNA upstream 239101 23884597 ~ 23988901 (-) False rab41
TU144597 lncRNA upstream 239101 23884597 ~ 23971180 (-) False rab41
TU144595 lncRNA upstream 244409 23889905 ~ 23892263 (-) False rab41
TU144657 lncRNA upstream 554003 24199499 ~ 24259346 (-) True G107667
XM_039813067.1 mRNA downstream 3942 23631502 ~ 23639346 (-) True si:rp71-46j2.7
XM_039812539.1 mRNA downstream 13132 23627091 ~ 23630156 (-) True LOC120566236
XM_039813911.1 mRNA downstream 16923 23588130 ~ 23626365 (-) True mrpl11
XM_039814041.1 mRNA downstream 103902 23536699 ~ 23539386 (-) True ccdc85b
XM_039814157.1 mRNA downstream 116328 23520126 ~ 23526960 (-) True yif1a
XM_039813646.1 mRNA upstream 639 23646135 ~ 23651722 (-) True slc25a43
XM_039814054.1 mRNA upstream 41098 23686594 ~ 23692809 (-) True chic1
XM_039813296.1 mRNA upstream 48774 23694270 ~ 23697490 (-) True cdx4
XM_039813298.1 mRNA upstream 64525 23710021 ~ 23757151 (-) True kdrl
XM_039812850.1 mRNA upstream 124795 23770291 ~ 23856291 (-) False dlg3
unassigned_transcript_474 other downstream 269280 23373936 ~ 23374008 (-) True trnaf-gaa_66
TU144162 other downstream 456277 23184272 ~ 23187011 (-) False rnaseh2c
TU144153 other downstream 466288 23175691 ~ 23177000 (-) False trpt1
unassigned_transcript_473 other downstream 477860 23165357 ~ 23165428 (-) True trnaw-cca_12
unassigned_transcript_472 other downstream 481829 23161388 ~ 23161459 (-) True trnaw-cca_11
XR_005640439.1 other upstream 241328 23886824 ~ 23892301 (-) False rab41
TU144931 other upstream 927945 24573441 ~ 24579099 (-) True G107864
unassigned_transcript_475 other upstream 1216616 24862112 ~ 24862184 (-) False trnav-uac_15
TU145115 other upstream 1634107 25279603 ~ 25282199 (-) False G107989
TU145117 other upstream 1634107 25279603 ~ 25288086 (-) True G107989

Expression Profile