RNA id: XM_039814450.1


Basic Information

Item Value
RNA id XM_039814450.1
length 2894
RNA type mRNA
GC content 0.48
exon number 13
gene id slc34a1b
representative False

Chromosome Information

Item Value
chromosome id NC_053121.1
NCBI id CM020918.1
chromosome length 40300294
location 19002512 ~ 19015339 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

TTAATCGACACGAGATGAGGTGTTTCCTGGTAGCTTATTTAAAGATGATTTACACTTCAGTCTGCTACTTTCCAGGGGGTCATACACAACACCAGACTGTTTCAGACAAGCATTCAAAGCACCATGTCCTCTCGGTCTATAACTATAGTGTCTTATGGACGGAGCACAGGGCTCCACTACAATGGGTTGAGGATGCATGGCACGCAGCTCTCCTCACAGCCCAAACTCCTGCAGGAGGAGGACGGGGAGTCCGGCATGGGCTCCAGCCTTGATCTCAGCAGCAGTCTTGAGGGCTACAGCCAACATACCAATCGTCCCTTCAGCAAACCTTCACTCAGGGAGGCAGACAGACTCCCTAAAGAGAAAGATAGCTCTCCAGAGCCGACAGCAGTGAGTCCGATCAAACAGCTCCTTATCAATTTATCTAAAAtgcccctcctcctcatcctcctcttcttctttgtttgCTCCTTGGACACTCTGAGCTCTGCCTTCCAGTTAGCAGGGGGTAAAGTGGCAGGGGACATTTTCCAGGACAATGCGGTGCTGTCTAACCCTGTGGCAGGGCTGGTGGTGGGGATCTTGGTTACTGTGCTAGTCCAGAGCTCATCCACCTCCACATCCATTGTCGTCAGTCTGGTGGCCTCTGGACTGCTAGAAGTGAGGTCAGCTGTTCCAATCATCATGGGGACCAATATTGGGACTTCAGTCACAAACACCATTGTGGCAATGATGCAAGCAGCGGAGAGGACCGAGTTTCAACGTGCCTTTGCTGGGGCAACGATCCACGACTGCTTCAACTGGCTGTCGGTGCTGGTTCTGCTGCCGCTGGAGGTGGCGAGTGGCCTCATGGCCCGGCTGTCAcacatgctggtcaccagcttCAAGCTTCAACCAGGGGAAGAAGCACCTGAGCTGCTCAAAGTCATCACCGAGCCAGTCACAAAGCTCATCATACAGCTGGACAAGTGTGTGATCACAGGCATCGCCATGGGAAATGAGGACATGAGGAACAGGAGCCTGGTGAAAGAATGGTGCCAGACTGACCTTGTTATGtCCACTGGCAATGTGAGCACTGGAAACTGTGGCCCCAGTCATGACTTGTCCCATTCGTCACTGAAGTGTAGGCATTTGTTTGTGTCTACTGGACTGTCAGACCTCACGGTGGGCCTGATTCTCCTGGCAGGCTCTCTGGCTGTCCTCTGCACCTGTCTGCTGCTTCTGGTCAAGCTGCTCAACTCTCTTCTTAAAGGCCAAGTCGCAAAGGTTATCCATAAAGTCATCAACACAGACCTGCCATATCCGTGTGGGTGGCTGTCAGGATACATGGCCATGTTTGTGGGTGCAGCGGTAACATTTGTGGTCCAGAGCAGCTCTGTCTTTACTTCAACCATGACTCCCCTGATAGGTATTGGTGTGATCAGCCTGGAGCGGGCCTATCCTCTCACCCTCGGGTCCAACATTGGCACCACTGCCACAGCCCTGCTGGCAGCTCTGGCCAGTCCTGGGAACAAGCTAGCAGCGGCCATACAAATTGCTCTGTGTCACCTCTTCTTCAACGTCTTTGGCATTCTGCTGTGGTATCCTTTTCCGTTAATGCGCCTGCCGATAAGGATGGCTCGTGTCCTGGGTGAGCGCACTGCCAAGTACCGCTGGTTTGCAGTCTTGTACCTTCTCCTTTGCTTCTTGCTTCTGCCCTCGCTGGTGCTGGGCCTCTCGCTGGCAGGCTGGCGGGTGATGGCTGGCGTTGGGGCTCCTTTCCTTGGGGTGACAATCTTCATCACCTTGGTAAATGTGATGCAGGCTCGTAGTCCTCGCCACCTGCCCACTAAGCTCCAGAGCTGGGACTTCCTGCCCAAGTGGATGCACTCTCTCAAACCGCTCGACCGCCTCATCACCAAGGCAACTGTCTGTTGCAGCTCTGCAAGCGAGGATGAGcatggagaagaagaagaggagcatATATCGACACAGACGACCTCTGTCAACACGCAGAAAGAGCCTGCCCAGAGGAAGGCACAGCTGGCTTATGACAACCCAGTCCTGGACTTCCTGGATGAGAGCAGACCAGGTGTGAGGGTGCTTAAATTAAAAGGGTTAGAGAGGTGCAACAGCACTCCACTGTAGTCAAACAACTTTTATACTGCATGTTGTATATAATATTGTGGTGAGAGTTGGAATTTGCCATTTTATAATGCTCTGAAAAATACCCCCTATTTTGATTATATATTAATTGATAATCAGAAGATCCTCCCAAAACTAGGCTAAATATCATGAACACAGCATGAGATGTTCATCCATGTTTGATTTCCATCCAGCTGAGCAAGCTTCACCTGCTGATGAAGATCATATGATATGATCAAAAGCTCTAGATCAGCTacttaatgcattttttttatcacctgTTGTCGAGATCAATAATGAACTTTGAAACTCAATTAATGATGCATAAACAGCATGATTTAGGAACTGCATTAAAGGTACACTGAggagtttttgaccactagtGGTGCTATGGAGCAATGTTTTTATAAGTGAGGCCCAATTTTGTTTGTGCACATGCAAGCATGCATTCCTGCTTTTGGTTTCAAGCCATTTAGCTTATAAGCCAAAACAAAAAGGTAGCAATGCAACgacaaaaagaaacacaaaatgtaaacatgtcaacttttgtttgtttacaaaaaaacctccacagcacagctttaactagccaacaatatttCTTGCTGCAAATGTATATAAATGAATATAAAACTGATCATTGTTAGCGCTTAAATATCCCTGGATTCAGCTGTCCTGGGTGCAAAGCTCATCTATTTTGTGTTGTCTGTTAGTCTAAAAAGGAAACCAGCACTGTTGGTAACCCAAATTATAATGATAAAACAATTTTA

Function

GO:

id name namespace
GO:0035435 phosphate ion transmembrane transport biological_process
GO:0044341 sodium-dependent phosphate transport biological_process
GO:0016020 membrane cellular_component

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU142437 lncRNA downstream 398 19001772 ~ 19002114 (-) True G106068
TU142435 lncRNA downstream 2637 18998540 ~ 18999875 (-) True G106066
TU142426 lncRNA downstream 273480 18710042 ~ 18729032 (-) True G106057
TU142304 lncRNA downstream 450828 18550110 ~ 18551684 (-) True G105967
TU142250 lncRNA downstream 688111 18285958 ~ 18314401 (-) False reep2
TU142448 lncRNA upstream 2413 19017752 ~ 19018811 (-) False rgs14b
TU142450 lncRNA upstream 31925 19047264 ~ 19047863 (-) True G106073
TU142451 lncRNA upstream 34035 19049374 ~ 19055694 (-) False G106074
TU142452 lncRNA upstream 34035 19049374 ~ 19053009 (-) True G106074
TU142462 lncRNA upstream 55509 19070848 ~ 19071183 (-) True G106084
XM_039812974.1 mRNA downstream 50979 18938218 ~ 18951533 (-) False simc1
XM_039812973.1 mRNA downstream 50980 18935651 ~ 18951532 (-) True simc1
XM_039812972.1 mRNA downstream 68073 18915363 ~ 18934439 (-) True cnot6a
XM_039813619.1 mRNA downstream 162614 18707287 ~ 18839898 (-) False LOC120566918
XM_039813337.1 mRNA upstream 2413 19017752 ~ 19044951 (-) False rgs14b
XM_039813335.1 mRNA upstream 2413 19017752 ~ 19044951 (-) False rgs14b
XM_039813336.1 mRNA upstream 2413 19017752 ~ 19044951 (-) False rgs14b
XM_039813334.1 mRNA upstream 2413 19017752 ~ 19044951 (-) True rgs14b
XM_039813338.1 mRNA upstream 2413 19017752 ~ 19044929 (-) False rgs14b
TU142417 other downstream 311102 18687788 ~ 18691410 (-) True LOC120566257
TU142254 other downstream 696817 18303269 ~ 18305695 (-) False reep2
TU142092 other downstream 1010641 17987258 ~ 17991871 (-) False sfxn1
TU142030 other downstream 1207289 17783560 ~ 17795223 (-) False LOC120567448
XR_005640507.1 other downstream 1424701 17522141 ~ 17577811 (-) False nexmifb
TU142573 other upstream 200650 19215989 ~ 19219144 (-) False LOC120566717
TU142773 other upstream 464679 19480018 ~ 19482558 (-) False tlr1
TU142874 other upstream 957076 19972415 ~ 19981133 (-) False fgf18a
TU142968 other upstream 1215569 20230908 ~ 20233924 (-) True G106443
TU143328 other upstream 2112499 21127838 ~ 21130970 (-) True G106728

Expression Profile