Item | Value |
---|---|
RNA id | XR_005640456.1 |
length | 565 |
lncRNA type | inter_gene |
GC content | 0.44 |
exon number | 3 |
gene id | LOC120566739 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_053121.1 |
NCBI id | CM020918.1 |
chromosome length | 40300294 |
location | 22590860 ~ 22592246 (-) |
genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
species | eurasian perch (Perca fluviatilis) |
id | name | namespace |
---|---|---|
GO:0035235 | ionotropic glutamate receptor signaling pathway | biological_process |
GO:0007215 | glutamate receptor signaling pathway | biological_process |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU143848 | lncRNA | downstream | 112402 | 22453589 ~ 22478458 (-) | True | LOC120566740 |
XR_005640457.1 | lncRNA | downstream | 112408 | 22453871 ~ 22478452 (-) | False | LOC120566740 |
TU143811 | lncRNA | downstream | 277822 | 22312806 ~ 22313038 (-) | True | G107022 |
TU143809 | lncRNA | downstream | 279017 | 22311620 ~ 22311843 (-) | True | G107020 |
TU143781 | lncRNA | downstream | 709999 | 21880637 ~ 21880861 (-) | True | G106994 |
TU143866 | lncRNA | upstream | 414 | 22592660 ~ 22594881 (-) | True | G107070 |
TU143869 | lncRNA | upstream | 8894 | 22601140 ~ 22605668 (-) | True | G107072 |
TU143905 | lncRNA | upstream | 91487 | 22683733 ~ 22685458 (-) | True | G107097 |
TU143915 | lncRNA | upstream | 120791 | 22713037 ~ 22718770 (-) | True | G107102 |
TU143987 | lncRNA | upstream | 263879 | 22856125 ~ 22856346 (-) | True | G107160 |
XM_039812944.1 | mRNA | downstream | 182649 | 22375266 ~ 22408211 (-) | True | tsc22d3 |
XM_039812942.1 | mRNA | downstream | 208320 | 22375266 ~ 22382540 (-) | False | tsc22d3 |
XM_039812945.1 | mRNA | downstream | 212494 | 22375266 ~ 22378366 (-) | False | tsc22d3 |
XM_039813572.1 | mRNA | downstream | 575107 | 21884772 ~ 22015753 (-) | False | pcdh11 |
XM_039813571.1 | mRNA | downstream | 575107 | 21884772 ~ 22015753 (-) | True | pcdh11 |
XM_039814009.1 | mRNA | upstream | 126648 | 22718894 ~ 22743071 (-) | True | slc16a2 |
XM_039814021.1 | mRNA | upstream | 186159 | 22778405 ~ 22783217 (-) | False | LOC120567161 |
XM_039814020.1 | mRNA | upstream | 186159 | 22778405 ~ 22783217 (-) | True | LOC120567161 |
XM_039814022.1 | mRNA | upstream | 186660 | 22778906 ~ 22783217 (-) | False | LOC120567161 |
XM_039813978.1 | mRNA | upstream | 238164 | 22830410 ~ 22840569 (-) | False | dpf2l |
TU143804 | other | downstream | 470793 | 22119685 ~ 22120067 (-) | True | G107015 |
TU143775 | other | downstream | 800135 | 21790253 ~ 21790725 (-) | True | G106988 |
TU143328 | other | downstream | 1459890 | 21127838 ~ 21130970 (-) | True | G106728 |
TU142968 | other | downstream | 2356936 | 20230908 ~ 20233924 (-) | True | G106443 |
TU142874 | other | downstream | 2609727 | 19972415 ~ 19981133 (-) | False | fgf18a |
TU143931 | other | upstream | 98914 | 22691160 ~ 22692831 (-) | True | G107117 |
TU144086 | other | upstream | 398741 | 22990987 ~ 22993229 (-) | True | G107235 |
TU144154 | other | upstream | 537463 | 23129709 ~ 23134785 (-) | True | G107284 |
unassigned_transcript_471 | other | upstream | 568613 | 23160859 ~ 23160930 (-) | True | trnaw-cca_10 |
unassigned_transcript_472 | other | upstream | 569142 | 23161388 ~ 23161459 (-) | True | trnaw-cca_11 |