Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_005640528.1 |
| length | 920 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 2 |
| gene id | LOC120567160 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053121.1 |
| NCBI id | CM020918.1 |
| chromosome length | 40300294 |
| location | 22723025 ~ 22725653 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0043292 | contractile fiber | cellular_component |
| GO:0044449 | obsolete contractile fiber part | cellular_component |
| GO:0036379 | myofilament | cellular_component |
| GO:0005861 | troponin complex | cellular_component |
| GO:0005865 | striated muscle thin filament | cellular_component |
| GO:0030016 | myofibril | cellular_component |
| GO:0030017 | sarcomere | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU143870 | lncRNA | upstream | 91655 | 22631079 ~ 22631370 (+) | True | G107073 |
| TU143843 | lncRNA | upstream | 307690 | 22415002 ~ 22415335 (+) | True | G107050 |
| XR_005640407.1 | lncRNA | upstream | 325974 | 22390353 ~ 22397051 (+) | True | LOC120566464 |
| TU143814 | lncRNA | upstream | 344685 | 22331012 ~ 22378340 (+) | True | G107025 |
| TU143816 | lncRNA | upstream | 344685 | 22331012 ~ 22378340 (+) | False | G107025 |
| TU143967 | lncRNA | downstream | 97948 | 22823601 ~ 22823862 (+) | True | G107149 |
| TU143988 | lncRNA | downstream | 131002 | 22856655 ~ 22856868 (+) | True | G107161 |
| TU143991 | lncRNA | downstream | 140315 | 22865968 ~ 22866201 (+) | True | G107164 |
| TU143993 | lncRNA | downstream | 141426 | 22867079 ~ 22874836 (+) | False | LOC120566955 |
| XR_005640493.1 | lncRNA | downstream | 141819 | 22867472 ~ 22875098 (+) | True | LOC120566955 |
| XM_039813163.1 | mRNA | upstream | 18004 | 22685286 ~ 22705021 (+) | True | f8 |
| XM_039813063.1 | mRNA | upstream | 38853 | 22664890 ~ 22684172 (+) | True | zgc:152774 |
| XM_039814406.1 | mRNA | upstream | 62775 | 22650018 ~ 22660250 (+) | False | pmt |
| XM_039814405.1 | mRNA | upstream | 62775 | 22650378 ~ 22660250 (+) | True | pmt |
| XM_039813358.1 | mRNA | upstream | 119754 | 22435278 ~ 22603271 (+) | True | mid2 |
| XM_039814015.1 | mRNA | downstream | 17954 | 22743607 ~ 22753993 (+) | False | LOC120567158 |
| XM_039814017.1 | mRNA | downstream | 26043 | 22751696 ~ 22753993 (+) | False | LOC120567158 |
| XM_039814016.1 | mRNA | downstream | 26049 | 22751702 ~ 22753993 (+) | True | LOC120567158 |
| XM_039814019.1 | mRNA | downstream | 28988 | 22754641 ~ 22762526 (+) | False | si:dkey-34l15.1 |
| XM_039814018.1 | mRNA | downstream | 34506 | 22760159 ~ 22762526 (+) | True | si:dkey-34l15.1 |
| XR_005640584.1 | other | upstream | 1261575 | 21448804 ~ 21461450 (+) | False | stx3a |
| TU143018 | other | upstream | 2370858 | 20351721 ~ 20352167 (+) | True | G106465 |
| XR_005640374.1 | other | upstream | 2661687 | 20043031 ~ 20061338 (+) | False | LOC120566323 |
| TU142686 | other | upstream | 3117252 | 19604840 ~ 19605773 (+) | False | G106237 |
| TU142049 | other | upstream | 4829495 | 17890967 ~ 17893530 (+) | False | gabra6a |
| TU143990 | other | downstream | 136537 | 22862190 ~ 22865676 (+) | True | G107163 |
| TU143997 | other | downstream | 229319 | 22954972 ~ 22973761 (+) | True | G107168 |
| TU144145 | other | downstream | 532618 | 23258271 ~ 23262229 (+) | False | tgfb5 |
| TU144214 | other | downstream | 543138 | 23268791 ~ 23270216 (+) | True | G107333 |
| TU144280 | other | downstream | 728914 | 23454567 ~ 23466184 (+) | False | ubl3b |
