RNA id: TU148908


Basic Information

Item Value
RNA id TU148908
length 662
lncRNA type sense_over
GC content 0.50
exon number 3
gene id G110672
representative True

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 90965 ~ 151036 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

atacacacacagagacacacacacagagacacacacacagagacacacagagacacacagagacacacacacagagacacacacacagagacacacacacacacacagagacacacagagacacacacagagacacacagagacacacacagagacacacagagacacacagagacacacagtcacacacacacacacacacacagagagacacacacacacacacacacacacacacacacagagacacacacacacacacacacacagacagacacacacacagagacacacacacagagacacacacagagacacacagagacacacacagagacacacacagagacacacagagacacacacagagacacacacagagacacacagagacacacacacagacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaacacacacacacacacacacacacagacacacacacacacagacacacacacacagacacacacacacacacacacacagagacacacacacagagacacacacagacacacacacagagatacacacacacacacacacacaagagacacacactcagagacacacacacacacacacacacacacacacac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU148923 lncRNA upstream 3062 87006 ~ 87903 (+) True G110687
TU148922 lncRNA upstream 5038 85512 ~ 85927 (+) True G110686
TU148907 lncRNA upstream 42193 21719 ~ 48772 (+) True G110671
TU148905 lncRNA downstream 222 151258 ~ 203323 (+) True G110669
TU148899 lncRNA downstream 23536 174572 ~ 175357 (+) False LOC120568467
TU148960 lncRNA downstream 44953 195989 ~ 200502 (+) True G110707
TU148956 lncRNA downstream 46479 197515 ~ 261927 (+) True G110704
XR_005640600.1 lncRNA downstream 79053 230089 ~ 234490 (+) True LOC120567641
XM_039816025.1 mRNA downstream 31826 182862 ~ 211334 (+) True LOC120568468
XM_039816841.1 mRNA downstream 59209 210245 ~ 213602 (+) True LOC120569035
XM_039814730.1 mRNA downstream 161972 313008 ~ 313994 (+) True LOC120567748
XM_039816879.1 mRNA downstream 179315 330351 ~ 331330 (+) True LOC120569058
XM_039814764.1 mRNA downstream 205022 356058 ~ 357039 (+) True LOC120567754
TU148914 other upstream 17741 72687 ~ 73224 (+) True G110678
TU148917 other downstream 7670 158706 ~ 173988 (+) False LOC120568467
TU148954 other downstream 31828 182864 ~ 213602 (+) False G110704
TU149056 other downstream 372414 523450 ~ 525151 (+) True G110768
TU149084 other downstream 461077 612113 ~ 615996 (+) True G110789
TU149103 other downstream 586788 737824 ~ 745038 (+) False dnajc1

Expression Profile