RNA id: TU148959


Basic Information

Item Value
RNA id TU148959
length 232
lncRNA type inter_gene
GC content 0.50
exon number 2
gene id G110706
representative True

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 267140 ~ 288259 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtctgtctgtctgtctgtctgtctgtgtctgtctgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtctctgtgtgtgtgtgtgtctctgtgtgtgtgtatgtgtctgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU148956 lncRNA upstream 5213 197515 ~ 261927 (+) True G110704
TU148970 lncRNA upstream 20596 245080 ~ 246544 (+) True G110711
XR_005640600.1 lncRNA upstream 32650 230089 ~ 234490 (+) True LOC120567641
TU148905 lncRNA upstream 63817 151258 ~ 203323 (+) True G110669
TU148960 lncRNA upstream 66638 195989 ~ 200502 (+) True G110707
TU148993 lncRNA downstream 80079 368338 ~ 372419 (+) True G110726
TU148995 lncRNA downstream 86373 374632 ~ 376039 (+) True G110727
TU149012 lncRNA downstream 110775 399034 ~ 400172 (+) True G110735
TU149032 lncRNA downstream 158301 446560 ~ 471062 (+) True G110745
TU149058 lncRNA downstream 240937 529196 ~ 694192 (+) True G110769
XM_039816841.1 mRNA upstream 53538 210245 ~ 213602 (+) True LOC120569035
XM_039816025.1 mRNA upstream 55806 182862 ~ 211334 (+) True LOC120568468
XM_039816024.1 mRNA upstream 91768 146242 ~ 175372 (+) True LOC120568467
XM_039814730.1 mRNA downstream 24749 313008 ~ 313994 (+) True LOC120567748
XM_039816879.1 mRNA downstream 42092 330351 ~ 331330 (+) True LOC120569058
XM_039814764.1 mRNA downstream 67799 356058 ~ 357039 (+) True LOC120567754
XM_039816040.1 mRNA downstream 75494 363753 ~ 364184 (+) True LOC120568476
XM_039814703.1 mRNA downstream 358514 646773 ~ 648472 (+) True LOC120567728
TU148954 other upstream 53538 182864 ~ 213602 (+) False G110704
TU148917 other upstream 93152 158706 ~ 173988 (+) False LOC120568467
TU148952 other upstream 110530 146254 ~ 156610 (+) False LOC120568467
TU148914 other upstream 193916 72687 ~ 73224 (+) True G110678
TU149056 other downstream 235191 523450 ~ 525151 (+) True G110768
TU149084 other downstream 323854 612113 ~ 615996 (+) True G110789
TU149103 other downstream 449565 737824 ~ 745038 (+) False dnajc1
TU149101 other downstream 456910 745169 ~ 754429 (+) False dnajc1
TU149102 other downstream 456910 745169 ~ 754429 (+) False dnajc1

Expression Profile