RNA id: TU149135


Basic Information

Item Value
RNA id TU149135
length 268
lncRNA type inter_gene
GC content 0.50
exon number 2
gene id G110823
representative False

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 766236 ~ 766773 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

acacacacacacacacagagacacacacagacacacacacacacacacacacacacacagacacacacacagagacacacacagacacacacacagacacacacacagagacacacacacagacacacacacacacagacacacacacagagacacacacacacacacacacagacagagacacacacagagcacacacacagacacacacacacacagacacacacacagagacacacacacacacacacagacagagacacacaca

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU149100 lncRNA upstream 9738 754531 ~ 756498 (+) False dnajc1
TU149134 lncRNA upstream 17561 747721 ~ 748675 (+) True G110822
TU149104 lncRNA upstream 77456 688490 ~ 688780 (+) True G110806
TU149090 lncRNA upstream 124620 641286 ~ 641616 (+) True G110794
TU149080 lncRNA upstream 159847 605618 ~ 606389 (+) True G110788
TU149141 lncRNA downstream 11554 778327 ~ 779219 (+) True G110826
TU149149 lncRNA downstream 39973 806746 ~ 808382 (+) True G110829
TU149153 lncRNA downstream 39973 806746 ~ 808382 (+) False G110829
TU149154 lncRNA downstream 39973 806746 ~ 808382 (+) False G110829
TU149156 lncRNA downstream 39973 806746 ~ 808382 (+) False G110829
XM_039815675.1 mRNA upstream 2105 757121 ~ 764131 (+) True c11h7orf25
XM_039816042.1 mRNA upstream 9740 737805 ~ 756496 (+) True dnajc1
XM_039816918.1 mRNA upstream 35012 693088 ~ 731224 (+) True LOC120569073
XM_039814703.1 mRNA upstream 117764 646773 ~ 648472 (+) True LOC120567728
XM_039816040.1 mRNA upstream 402052 363753 ~ 364184 (+) True LOC120568476
XM_039815033.1 mRNA downstream 150355 917128 ~ 935180 (+) False LOC120567931
XM_039815032.1 mRNA downstream 163295 930068 ~ 935180 (+) True LOC120567931
XM_039815043.1 mRNA downstream 215742 982515 ~ 1002554 (+) True si:dkey-154p10.3
XM_039815040.1 mRNA downstream 226586 993359 ~ 998215 (+) True LOC120567936
XM_039815041.1 mRNA downstream 226587 993360 ~ 998215 (+) False LOC120567936
TU149101 other upstream 11807 745169 ~ 754429 (+) False dnajc1
TU149102 other upstream 11807 745169 ~ 754429 (+) False dnajc1
TU149103 other upstream 21198 737824 ~ 745038 (+) False dnajc1
TU149084 other upstream 150240 612113 ~ 615996 (+) True G110789
TU149056 other upstream 241085 523450 ~ 525151 (+) True G110768
TU149506 other downstream 215746 982519 ~ 985253 (+) False si:dkey-154p10.3
TU149501 other downstream 313700 1080473 ~ 1092725 (+) False cdyl
TU149498 other downstream 321824 1088597 ~ 1092725 (+) False cdyl
TU149499 other downstream 321824 1088597 ~ 1092725 (+) False cdyl
TU149593 other downstream 475876 1242649 ~ 1336191 (+) True G111076

Expression Profile