RNA id: TU149180


Basic Information

Item Value
RNA id TU149180
length 757
RNA type TUCP
GC content 0.46
exon number 4
gene id G110840
representative True

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 57407 ~ 174865 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GAGACATACAGGACACACTGctctaactgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtctgtgtctgtgtctgtgtgtgtgtgtctgtgtgtgtgtctgtgtgtgcctgtgtgtgtgtgtctctgtgtatgtgtgtgtctgtgtatgtgtgtatgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtctgtgtgtgtgtgtgtctgtgtgtgtgtctgtgtgtgcctgtgtgtgtgtgtctctgtgtatgtgtgtgtctgtgtatgtgtgtgtgtgtgtatgtgtgtgtgtgtctctgtgtgtgtgtatgtgtgtgtgtgtctctgtgtgtgtgtgtgtctctgtgtgtgtgtgtctctgtgtgtgtgtctctgtgtgtgtgtctctgtgtgtgtgtgtctctgtgtgtgtgtgtctgtgtgtgtgtgtctgtctgtctgtctgtctgtctgtctgtctgtgtgtgtgtctgtgtgtctgtgtgtgtctgtgtgtgtctgtctgtctgtgtgtgtgtaagtttttGATGTCTTTTTCAACGTTATTTCAATTTTCAAcgttatttatagtatcaaatcataacaggagttatctggagacactttacagatagagaaggtctagaccacactctataatttacaaagacccaacaattacagtaattccccccaagagcaag

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU149189 lncRNA downstream 3969 46432 ~ 53438 (-) True G110845
TU149188 lncRNA downstream 7965 44777 ~ 49442 (-) True G110844
TU149251 lncRNA upstream 23005 197870 ~ 198236 (-) False G110878
TU149252 lncRNA upstream 23005 197870 ~ 198236 (-) False G110878
TU149253 lncRNA upstream 23005 197870 ~ 198236 (-) True G110878
TU149284 lncRNA upstream 81516 256381 ~ 269399 (-) True G110896
TU149272 lncRNA upstream 83219 258084 ~ 261573 (-) False adhfe1
XM_039816316.1 mRNA downstream 11426 274 ~ 45981 (-) True LOC120568662
XM_039814765.1 mRNA upstream 61479 236344 ~ 243099 (-) False LOC120567755
XM_039816038.1 mRNA upstream 83210 258075 ~ 302142 (-) True adhfe1
XM_039814761.1 mRNA upstream 134244 309109 ~ 310062 (-) True LOC120567752
XM_039816880.1 mRNA upstream 151561 326426 ~ 327379 (-) True LOC120569059
XM_039816864.1 mRNA upstream 213826 388691 ~ 397504 (-) True LOC120569047
TU149261 other upstream 60392 235257 ~ 243086 (-) True LOC120567755
TU149262 other upstream 60392 235257 ~ 243086 (-) False LOC120567755
TU149263 other upstream 60392 235257 ~ 243086 (-) False LOC120567755
TU149279 other upstream 92094 266959 ~ 288340 (-) False adhfe1
TU149280 other upstream 92094 266959 ~ 288340 (-) False adhfe1

Expression Profile