RNA id: TU149190


Basic Information

Item Value
RNA id TU149190
length 284
lncRNA type inter_gene
GC content 0.50
exon number 2
gene id G110846
representative True

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 149998 ~ 150962 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

tctgtgtgtgtgtctgtgtgtgtctctgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtctgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtctctgtgtgtctctgtgtgtgtctctgtgtgtgtctctgtgtgtctctgtgtgtgtctgtgtgtgtctgtgtgtgtctctgtgtgtgt

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU149235 lncRNA downstream 4945 141265 ~ 145053 (-) False fastk
TU149231 lncRNA downstream 8097 119654 ~ 141901 (-) True G110859
TU149230 lncRNA downstream 8322 119654 ~ 141676 (-) False G110859
XR_005640766.1 lncRNA downstream 38517 93338 ~ 111481 (-) False LOC120568736
XR_005640765.1 lncRNA downstream 38519 93338 ~ 111479 (-) False LOC120568736
TU149238 lncRNA upstream 205 151167 ~ 202319 (-) True G110865
TU149247 lncRNA upstream 22693 173655 ~ 230223 (-) True G110874
TU149251 lncRNA upstream 46908 197870 ~ 198236 (-) False G110878
TU149252 lncRNA upstream 46908 197870 ~ 198236 (-) False G110878
TU149253 lncRNA upstream 46908 197870 ~ 198236 (-) True G110878
XM_039816023.1 mRNA downstream 4950 120850 ~ 145048 (-) True fastk
XM_039816727.1 mRNA downstream 60056 64577 ~ 89942 (-) True LOC120568960
XM_039816726.1 mRNA downstream 60056 66147 ~ 89942 (-) False LOC120568960
XM_039816953.1 mRNA downstream 86538 52608 ~ 63460 (-) True ttc19
XM_039816316.1 mRNA downstream 104017 274 ~ 45981 (-) True LOC120568662
XM_039814765.1 mRNA upstream 85382 236344 ~ 243099 (-) False LOC120567755
XM_039816038.1 mRNA upstream 107113 258075 ~ 302142 (-) True adhfe1
XM_039814761.1 mRNA upstream 158147 309109 ~ 310062 (-) True LOC120567752
XM_039816880.1 mRNA upstream 175464 326426 ~ 327379 (-) True LOC120569059
XM_039816864.1 mRNA upstream 237729 388691 ~ 397504 (-) True LOC120569047
TU149234 other downstream 9316 132728 ~ 140682 (-) False fastk
TU149261 other upstream 84295 235257 ~ 243086 (-) True LOC120567755
TU149262 other upstream 84295 235257 ~ 243086 (-) False LOC120567755
TU149263 other upstream 84295 235257 ~ 243086 (-) False LOC120567755
TU149279 other upstream 115997 266959 ~ 288340 (-) False adhfe1
TU149280 other upstream 115997 266959 ~ 288340 (-) False adhfe1

Expression Profile