RNA id: TU149235


Basic Information

Item Value
RNA id TU149235
length 283
lncRNA type sense_over
GC content 0.64
exon number 2
gene id fastk
representative False

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 120850 ~ 145053 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GGGTAATGCAGGATGGCGTCTGCGGGTTGTGTGGAGGAATGAAGCGGCTGACCGCTGCCTGTTTCCCCGGTGAACCCGCGCTGTCAGCGGCCTTAGTGTTTCAGCAGAGCGGAGCTGCCGGTGTTACTGAGCTATGAGGAGTAGTGTGCTGTTGCCCCCAGGCAGCCTGGCTGTTGGACTATGCTGTGTTTGTCCTCTGGGTGGCGCCTCCTGAGCCGAGCTCGCCGCTTCCCCCGCCCAGCCGCCGCTCAGCCAGTCGCCATGTACGCCACCCGCCTCTACA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_005640766.1 lncRNA downstream 29784 93338 ~ 111481 (-) False LOC120568736
XR_005640765.1 lncRNA downstream 29786 93338 ~ 111479 (-) False LOC120568736
XR_005640764.1 lncRNA downstream 29788 93338 ~ 111477 (-) False LOC120568736
XR_005640763.1 lncRNA downstream 29789 93338 ~ 111476 (-) True LOC120568736
TU149215 lncRNA downstream 29873 92555 ~ 111392 (-) False LOC120568736
TU149190 lncRNA upstream 4945 149998 ~ 150962 (-) True G110846
TU149238 lncRNA upstream 6114 151167 ~ 202319 (-) True G110865
TU149247 lncRNA upstream 28602 173655 ~ 230223 (-) True G110874
TU149251 lncRNA upstream 52817 197870 ~ 198236 (-) False G110878
TU149252 lncRNA upstream 52817 197870 ~ 198236 (-) False G110878
XM_039816727.1 mRNA downstream 51323 64577 ~ 89942 (-) True LOC120568960
XM_039816726.1 mRNA downstream 51323 66147 ~ 89942 (-) False LOC120568960
XM_039816953.1 mRNA downstream 77805 52608 ~ 63460 (-) True ttc19
XM_039816316.1 mRNA downstream 95284 274 ~ 45981 (-) True LOC120568662
XM_039814765.1 mRNA upstream 91291 236344 ~ 243099 (-) False LOC120567755
XM_039816038.1 mRNA upstream 113022 258075 ~ 302142 (-) True adhfe1
XM_039814761.1 mRNA upstream 164056 309109 ~ 310062 (-) True LOC120567752
XM_039816880.1 mRNA upstream 181373 326426 ~ 327379 (-) True LOC120569059
XM_039816864.1 mRNA upstream 243638 388691 ~ 397504 (-) True LOC120569047
TU149234 other downstream 583 132728 ~ 140682 (-) False fastk
TU149261 other upstream 90204 235257 ~ 243086 (-) True LOC120567755
TU149262 other upstream 90204 235257 ~ 243086 (-) False LOC120567755
TU149263 other upstream 90204 235257 ~ 243086 (-) False LOC120567755
TU149279 other upstream 121906 266959 ~ 288340 (-) False adhfe1
TU149280 other upstream 121906 266959 ~ 288340 (-) False adhfe1

Expression Profile