RNA id: TU149247


Basic Information

Item Value
RNA id TU149247
length 991
lncRNA type inter_gene
GC content 0.53
exon number 3
gene id G110874
representative True

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 173655 ~ 230223 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

TCACCTCGAAGGGGTTCAGTCGGTACGTGGGACATTCAGGAGAGTGCAGGTAACCGACTGGCTGCTGACACCAATAGACCTCCAACTGTCCGTCCAACGGGAAGCAGCCAAACTCGTCACAGCCTGGGGCAGAACCGGACTCTCTCTGGACCTGGGACACCGAGCTGGACTCTCTCTGGACCTGGGACACCGAGCTGGACTCTCTCTGGACCTGAGACACCGAGCTGGACTCTCTCTGGACCTGGGACACAGAGCTGGACTCTCTCTGGACCTGGGAAGCAGAGCTGGACTCTCTTTGGGCCTGGGAAGCAGAGCCAGACTGATCCTGATCCTGGGACACCGAGCTGGACTCCCTCTGGACCTGCACGATGGTGCTCAGCAGACTCTCCCCCTGAACCTGTAGGCCACAAGTCCACATTAAACCCTTTCCAACATGCAGACCTGCAGACCATTCTGCTGACAGACCGAGTATGACACCCCTCTGTTAGACTGaatccaatccaactttatttgttaagtgctTTAAAACAACCTAAATTGACCAAagtgctagcctgacaagccagacccacatccagatgttggacagacagacagacagcctgaTGTTCCAGAtgtgtgacagacagacagacagacagatgttccAGATGTGTACCTGAGAAGCCAGGTGTGAGGGCGGCCATCTTCCTGGCCAGAGCGTCTTTGTCCAGCTCCGTCTCCAGCTTCAGAGGACGCAGGTGGACTTTAAAGATGGACGCTCGGCCTTTGATGTCCGGAGGACCTGGGACACAAAAAACGCTGAGTCACTCGTCTATCAAACACCTAATTCACCTGTCAAAAACGCTGAGTCACTCGTCTATCAAACACCTACTTCACCCGTCAAAAACGCTGAGTCACTCGTCTATCAAACACCTAATTCACCCGTCAAAAACGCTGAGTCACTCGTCTATCAAACACCTAATTCACTCGTCTATCAAACACCTAATTC

Function

GO: NA

KEGG:

id description
ko04113 Meiosis - yeast

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU149190 lncRNA downstream 22693 149998 ~ 150962 (-) True G110846
TU149235 lncRNA downstream 28602 141265 ~ 145053 (-) False fastk
TU149231 lncRNA downstream 31754 119654 ~ 141901 (-) True G110859
TU149230 lncRNA downstream 31979 119654 ~ 141676 (-) False G110859
XR_005640767.1 lncRNA downstream 69382 103095 ~ 104273 (-) True LOC120568737
TU149284 lncRNA upstream 26158 256381 ~ 269399 (-) True G110896
TU149272 lncRNA upstream 27861 258084 ~ 261573 (-) False adhfe1
TU149273 lncRNA upstream 27861 258084 ~ 262448 (-) False adhfe1
TU149274 lncRNA upstream 27861 258084 ~ 261573 (-) False adhfe1
TU149287 lncRNA upstream 30380 260603 ~ 260948 (-) True G110899
XM_039816023.1 mRNA downstream 28607 120850 ~ 145048 (-) True fastk
XM_039816727.1 mRNA downstream 83713 64577 ~ 89942 (-) True LOC120568960
XM_039816726.1 mRNA downstream 83713 66147 ~ 89942 (-) False LOC120568960
XM_039816953.1 mRNA downstream 110195 52608 ~ 63460 (-) True ttc19
XM_039816316.1 mRNA downstream 127674 274 ~ 45981 (-) True LOC120568662
XM_039814765.1 mRNA upstream 6121 236344 ~ 243099 (-) False LOC120567755
XM_039816038.1 mRNA upstream 27852 258075 ~ 302142 (-) True adhfe1
XM_039814761.1 mRNA upstream 78886 309109 ~ 310062 (-) True LOC120567752
XM_039816880.1 mRNA upstream 96203 326426 ~ 327379 (-) True LOC120569059
XM_039816864.1 mRNA upstream 158468 388691 ~ 397504 (-) True LOC120569047
TU149234 other downstream 32973 132728 ~ 140682 (-) False fastk
TU149261 other upstream 5034 235257 ~ 243086 (-) True LOC120567755
TU149262 other upstream 5034 235257 ~ 243086 (-) False LOC120567755
TU149263 other upstream 5034 235257 ~ 243086 (-) False LOC120567755
TU149279 other upstream 36736 266959 ~ 288340 (-) False adhfe1
TU149280 other upstream 36736 266959 ~ 288340 (-) False adhfe1

Expression Profile