RNA id: TU149279



Basic Information


Item Value
RNA id TU149279
length 245
RNA type TUCP
GC content 0.68
exon number 3
gene id adhfe1
representative False

Chromosome Information


Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 258075 ~ 302142 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


CGGCACCGTGGACCCGCGGCACACACTGAGCATGCCCGAGAGAGTCGCCGCCAACAGCGGCTTCGACGTGCTCTgTCATGCTCTGGAGTCCTACACAGCCCTGCCGTACCACCAGCGGACCCCTTGCCCCCCCAACCCCCTGCAGCGCCCCGCCTACCAGGGCAGCAACCCCATCAGCGACGTCTGGTCCCGCCACGCCCTCGCCATGGTCGCCAAATACCTCAAACGTGAGGGACCCGAGGATG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU149288 lncRNA downstream 1728 264405 ~ 265231 (-) False adhfe1
TU149273 lncRNA downstream 4511 258084 ~ 262448 (-) False adhfe1
TU149272 lncRNA downstream 5386 258084 ~ 261573 (-) False adhfe1
TU149274 lncRNA downstream 5386 258084 ~ 261573 (-) False adhfe1
TU149287 lncRNA downstream 6011 260603 ~ 260948 (-) True G110899
TU149285 lncRNA upstream 1456 289796 ~ 290163 (-) False adhfe1
TU149286 lncRNA upstream 86973 375313 ~ 397191 (-) True G110898
TU149347 lncRNA upstream 209204 497544 ~ 543185 (-) True G110925
XR_005640620.1 lncRNA upstream 259995 548335 ~ 548652 (-) True LOC120567842
TU149394 lncRNA upstream 389478 677818 ~ 767571 (-) True G110946
XM_039814765.1 mRNA downstream 23860 236344 ~ 243099 (-) False LOC120567755
XM_039816023.1 mRNA downstream 121911 120850 ~ 145048 (-) True fastk
XM_039816727.1 mRNA downstream 177017 64577 ~ 89942 (-) True LOC120568960
XM_039816726.1 mRNA downstream 177017 66147 ~ 89942 (-) False LOC120568960
XM_039816953.1 mRNA downstream 203499 52608 ~ 63460 (-) True ttc19
XM_039814761.1 mRNA upstream 20769 309109 ~ 310062 (-) True LOC120567752
XM_039816880.1 mRNA upstream 38086 326426 ~ 327379 (-) True LOC120569059
XM_039816864.1 mRNA upstream 100351 388691 ~ 397504 (-) True LOC120569047
XM_039816863.1 mRNA upstream 100351 388691 ~ 395071 (-) False LOC120569047
XM_039815874.1 mRNA upstream 110694 399034 ~ 417701 (-) False LOC120568379
TU149261 other downstream 23873 235257 ~ 243086 (-) True LOC120567755
TU149262 other downstream 23873 235257 ~ 243086 (-) False LOC120567755
TU149263 other downstream 23873 235257 ~ 243086 (-) False LOC120567755
TU149180 other downstream 92094 57407 ~ 174865 (-) True G110840
TU149268 other upstream 87372 375712 ~ 382665 (-) True G110889
TU149269 other upstream 87372 375712 ~ 381616 (-) False G110889
TU149406 other upstream 465923 754263 ~ 766300 (-) True G110957
TU149470 other upstream 560842 849182 ~ 849492 (-) True G110988
TU149680 other upstream 716731 1005071 ~ 1005925 (-) True G111136

Expression Profile