RNA id: TU149284


Basic Information

Item Value
RNA id TU149284
length 529
lncRNA type sense_over
GC content 0.47
exon number 4
gene id G110896
representative True

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 256381 ~ 269399 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ggagaacttgctgACTAAATACCTTTTTGCCCCACTGTGTGTGTCCATATTTCAGAGTGTGGGGCTTCTTGTTGTGATGATGTGATACAAGACACTGTCAAGAGAATTAATAATACATTCACAgtatggtgtgtgtctgtgtgtgtgtctctctctctgtgtgtgtgtgtgtgtgtgtgtctctctctgtgtgtgtgtgtgtgtgtgtgtgtgtttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctctgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtctgtctctgtgtgtgtgtatgtgtctctctctgtgtgtatgtgtgtgtatgtgtctctctgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtctctctctgtgtgtgtgtgtgtgtgtgtgtctctctctctgtgtgtg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU149247 lncRNA downstream 26158 173655 ~ 230223 (-) True G110874
TU149238 lncRNA downstream 54062 151167 ~ 202319 (-) True G110865
TU149251 lncRNA downstream 58145 197870 ~ 198236 (-) False G110878
TU149252 lncRNA downstream 58145 197870 ~ 198236 (-) False G110878
TU149253 lncRNA downstream 58145 197870 ~ 198236 (-) True G110878
TU149285 lncRNA upstream 20397 289796 ~ 290163 (-) False adhfe1
TU149286 lncRNA upstream 105914 375313 ~ 397191 (-) True G110898
TU149347 lncRNA upstream 228145 497544 ~ 543185 (-) True G110925
XR_005640620.1 lncRNA upstream 278936 548335 ~ 548652 (-) True LOC120567842
TU149394 lncRNA upstream 408419 677818 ~ 767571 (-) True G110946
XM_039814765.1 mRNA downstream 13282 236344 ~ 243099 (-) False LOC120567755
XM_039816023.1 mRNA downstream 111333 120850 ~ 145048 (-) True fastk
XM_039816727.1 mRNA downstream 166439 64577 ~ 89942 (-) True LOC120568960
XM_039816726.1 mRNA downstream 166439 66147 ~ 89942 (-) False LOC120568960
XM_039816953.1 mRNA downstream 192921 52608 ~ 63460 (-) True ttc19
XM_039814761.1 mRNA upstream 39710 309109 ~ 310062 (-) True LOC120567752
XM_039816880.1 mRNA upstream 57027 326426 ~ 327379 (-) True LOC120569059
XM_039816864.1 mRNA upstream 119292 388691 ~ 397504 (-) True LOC120569047
XM_039816863.1 mRNA upstream 119292 388691 ~ 395071 (-) False LOC120569047
XM_039815874.1 mRNA upstream 129635 399034 ~ 417701 (-) False LOC120568379
TU149261 other downstream 13295 235257 ~ 243086 (-) True LOC120567755
TU149262 other downstream 13295 235257 ~ 243086 (-) False LOC120567755
TU149263 other downstream 13295 235257 ~ 243086 (-) False LOC120567755
TU149180 other downstream 81516 57407 ~ 174865 (-) True G110840
TU149268 other upstream 106313 375712 ~ 382665 (-) True G110889
TU149269 other upstream 106313 375712 ~ 381616 (-) False G110889
TU149406 other upstream 484864 754263 ~ 766300 (-) True G110957
TU149470 other upstream 579783 849182 ~ 849492 (-) True G110988
TU149680 other upstream 735672 1005071 ~ 1005925 (-) True G111136

Expression Profile